Parental gene:

THEM4, ENSDNOG00000005970

Aliases:None
Description:thioesterase superfamily member 4 [Source:HGNC Symbol;Acc:17947]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4740:4087..19642(-)


>ENSDNOG00000005970
TCAAAGGAAGGAAAACAAAGGTCACAGGCCCCATTCTTCACCAGAAGCTTTGAGGATGGCTTAGGCTTTGAAAATGCAAT
ATTCTATAATGAGGATGAGAAAAGAGCAGTTTGCTCGTTTCAAGGAGGCCCTTACCTGCAAGGAGCACGTGGATTCCTCC
ATGGAGGTACCACTTCAACCATGATCGATAATACTCTTAGTGTATATGCATTGTTATCTGGGGAATTTGCCATGACTGCC
AATCTCAACATCAATTTTAAAAGACCTATCCCCCTTAATTCTGTTGTTGTGATAAATGGCCAGCTTGATAAAATTGAAGG
AAGGGAAGTTTTTCTTTCCTATAGTGTTCAAAGTGTTGATGAGAAGATCCTGTACTCAGAGGCAACAAGCATATTTGTAC
AGTTGGATCCTGACAAAAGTTTGGCATAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 25 .86 RPM
SRP012922_cerebellum 15 .26 RPM
SRP012922_heart 15 .78 RPM
SRP012922_kidney 20 .81 RPM
SRP012922_liver 10 .53 RPM
SRP012922_lung 6 .41 RPM
SRP012922_quadricep_muscle 17 .65 RPM
SRP012922_spleen 7 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000355 ortholog_one2one 1 retrogene
retro_amel_1301,
Choloepus hoffmanni ENSCHOG00000000818 ortholog_one2many 1 retrogene
retro_chof_841,
Felis catus ENSFCAG00000003443 ortholog_one2one 1 retrogene
retro_fcat_387,
Homo sapiens ENSG00000159445 ortholog_one2one 2 retrogenes
retro_hsap_1569, retro_hsap_978,
Gorilla gorilla ENSGGOG00000008114 ortholog_one2one 2 retrogenes
retro_ggor_1195, retro_ggor_782,
Microcebus murinus ENSMICG00000010696 ortholog_one2one 4 retrogenes
retro_mmur_1241, retro_mmur_1436, retro_mmur_1505, retro_mmur_1574,
Nomascus leucogenys ENSNLEG00000010322 ortholog_one2one 1 retrogene
retro_nleu_1737,
Oryctolagus cuniculus ENSOCUG00000005194 ortholog_one2one 1 retrogene
retro_ocun_1341,
Pongo abelii ENSPPYG00000000851 ortholog_one2one 1 retrogene
retro_pabe_1295,
Pan troglodytes ENSPTRG00000001301 ortholog_one2one 2 retrogenes
retro_ptro_1056, retro_ptro_768,
Tupaia belangeri ENSTBEG00000003352 ortholog_one2one 2 retrogenes
retro_tbel_2412, retro_tbel_3266,
Tarsius syrichta ENSTSYG00000005739 ortholog_one2one 1 retrogene
retro_tsyr_579,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_710 64.08 97.89
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Download FASTA sequences of all ENSDNOG00000005970 retrocopies