Parental gene: | IFT52, ENSCPOG00000027175 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_45:9835599..9866578(+) |
>ENSCPOG00000027175
ATGGAGAAGGATGTTCGCAGCACCATTCTTTTCAATGCATACAAAAAGGAGATATTTACCATCAACAATGGCTATAAGTC
TATGCAGAAAAGACTTCGAAGTAATTGGAAGATTCAGAGTTTAAAAGACGAAATCACATCTGAGAAGCTAATTGGGGTGA
AACTGTGGATTACAGCTGGGCCAAGGGAAAAATTTACTGCAGCTGAGTTTGAAGTCCTAAAGAAGTATCTTGACAGTGGT
GGAGATATCCTTGTGATGCTTGGAGAAGGTGGAGAATCCAGATTTGACACCAATATTAACTTTCTACTAGAAGAATATGG
AATCATGGTTAATAATGATGCTGTGGTTAGAAATGTGTATTACAAGTATTTTCATCCTAAGGAAGCTCTGGTTTCCAATG
GAGTGTTGAACAGCAGGATTTGTTCCAGTATTTGCAAAGGCATTTCAGGAATCATTGATGAGGAGAGCAGTGGAAACAAT
GCCCAGGCTCTCACCTTTGTGTATCCTTTTGGTGCCACCCTGAGTGTCATGAAACCAGCAGTGGCTGTTCTGTCCACAGG
CTCCGTCTGCTTCCCGCTTAACAGACCCATCCTGGCTTTCTATCACTCGAAGAACCAAGGTGGGAAGCTGGCAGTGCTTG
GGTCATGTCACATGTTCAGTGACCAGTATTTGGATAAAGAAGAAAACAGCAAAATCATGGATGTTGTTTTCCAGTGGCTC
ACAACAGGAGACATCCACCTGAACCAGATTGATGCTGAGGACCCAGAGATCACCGATTACACGATGCTGCCCGACACCGC
CACCCTGTCAGAGCGGTTACGAGTGTGTCTCCAGGAGGGCGATGAGAACCCACGCGACTTTACTACCCTTTTCGATTTGT
CCATTTACCAGCTGGACACCACCTCCCTCCTCAAGGTCATCAAGGCTTATGAGCAGCTAAACGTGAAACATGAACCACTC
CAGCTCATCCAACCGCAATTTGAGACACCGCTTCCTGCCCTGCAGCCTGCTGTTTTCCCTCCCAGCTTCAGGGAGTTACC
CCCTCCTCCTCTGGAACTGTTTGACTTAGATGAAACATTTTCCTCCGAGAAGGCACGGCTTGCTCAGATTACCAATAAGT
GTACTGAAGAAGACCTGGAATTCTACGTCAGGAAATGTGGCGACATTCTTGGAGTAACCAGTAAGCTACCAAAGGATCAA
CAGGATGCCAAACATATTCTTGAGCACATCTTCTTCCAAGTGGTAGAATTCAAGAAACTGAACCAGGTACAGAGC
ATGGAGAAGGATGTTCGCAGCACCATTCTTTTCAATGCATACAAAAAGGAGATATTTACCATCAACAATGGCTATAAGTC
TATGCAGAAAAGACTTCGAAGTAATTGGAAGATTCAGAGTTTAAAAGACGAAATCACATCTGAGAAGCTAATTGGGGTGA
AACTGTGGATTACAGCTGGGCCAAGGGAAAAATTTACTGCAGCTGAGTTTGAAGTCCTAAAGAAGTATCTTGACAGTGGT
GGAGATATCCTTGTGATGCTTGGAGAAGGTGGAGAATCCAGATTTGACACCAATATTAACTTTCTACTAGAAGAATATGG
AATCATGGTTAATAATGATGCTGTGGTTAGAAATGTGTATTACAAGTATTTTCATCCTAAGGAAGCTCTGGTTTCCAATG
GAGTGTTGAACAGCAGGATTTGTTCCAGTATTTGCAAAGGCATTTCAGGAATCATTGATGAGGAGAGCAGTGGAAACAAT
GCCCAGGCTCTCACCTTTGTGTATCCTTTTGGTGCCACCCTGAGTGTCATGAAACCAGCAGTGGCTGTTCTGTCCACAGG
CTCCGTCTGCTTCCCGCTTAACAGACCCATCCTGGCTTTCTATCACTCGAAGAACCAAGGTGGGAAGCTGGCAGTGCTTG
GGTCATGTCACATGTTCAGTGACCAGTATTTGGATAAAGAAGAAAACAGCAAAATCATGGATGTTGTTTTCCAGTGGCTC
ACAACAGGAGACATCCACCTGAACCAGATTGATGCTGAGGACCCAGAGATCACCGATTACACGATGCTGCCCGACACCGC
CACCCTGTCAGAGCGGTTACGAGTGTGTCTCCAGGAGGGCGATGAGAACCCACGCGACTTTACTACCCTTTTCGATTTGT
CCATTTACCAGCTGGACACCACCTCCCTCCTCAAGGTCATCAAGGCTTATGAGCAGCTAAACGTGAAACATGAACCACTC
CAGCTCATCCAACCGCAATTTGAGACACCGCTTCCTGCCCTGCAGCCTGCTGTTTTCCCTCCCAGCTTCAGGGAGTTACC
CCCTCCTCCTCTGGAACTGTTTGACTTAGATGAAACATTTTCCTCCGAGAAGGCACGGCTTGCTCAGATTACCAATAAGT
GTACTGAAGAAGACCTGGAATTCTACGTCAGGAAATGTGGCGACATTCTTGGAGTAACCAGTAAGCTACCAAAGGATCAA
CAGGATGCCAAACATATTCTTGAGCACATCTTCTTCCAAGTGGTAGAATTCAAGAAACTGAACCAGGTACAGAGC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 13 .36 RPM |
| SRP017611_kidney | 50 .35 RPM |
| SRP017611_brain | 26 .92 RPM |
| SRP040447_lung | 29 .41 RPM |
| SRP040447_skeletal_muscle | 32 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000015182 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016664 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007699 | ortholog_one2one | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000014953 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_301 | 81.57 | 50.35 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000027175 retrocopies