Parental gene:

MEAF6, ENSCPOG00000025988

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_25:211702..234868(+)


>ENSCPOG00000025988
GAAACACTGGCAAACTTGGAGAGACAGATCTATGCTTTTGAAGGAAGCTATCTAGAAGACACGCAGATGTATGGCAATAT
TATTCGTGGCTGGGATCGGTATCTGACCAACCAAAAAAACTCCAACAGCAAAAACGACCGGAGGAACCGCAAGTTCAAGG
AGGCTGAGCGGCTCTTCAGTAAATCCTCAGTCACGTCGGCAGCCGCAGTAAGTGCACTGGCAGGAGTTCAGGACCAGCTC
ATTGAAAAGAGGGAGCCAGGAAGTGGGACGGAAAGTGATACTTCTCCAGACTTCCACAATCAAGAAAATGAGCCCAGCCA
GGAGGACCCTGAGGATCTGGATGGATCTGTGCAGGGAGTGAAACCTCAGAAGGCTGCTTCTTCCACTTCCTCAGGGAGTC
ATCATAGCAGCCATAAAAAGCGAAAGAATAAAAACCGGCACAGGATTGATCTGAAGTTAAACAAAAAACCACGATCTGAC
TATTAG

Library Parental gene expression (RPM)
SRP017611_liver 5 .75 RPM
SRP017611_kidney 8 .06 RPM
SRP017611_brain 15 .53 RPM
SRP040447_lung 13 .37 RPM
SRP040447_skeletal_muscle 5 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001927 ortholog_one2one 1 retrogene
retro_cjac_2767,
Erinaceus europaeus ENSEEUG00000013971 ortholog_one2one 3 retrogenes
retro_eeur_362, retro_eeur_469, retro_eeur_654,
Macropus eugenii ENSMEUG00000003403 ortholog_one2one 3 retrogenes
retro_meug_1279, retro_meug_584, retro_meug_727,
Myotis lucifugus ENSMLUG00000017128 ortholog_one2one 2 retrogenes
retro_mluc_436, retro_mluc_960,
Otolemur garnettii ENSOGAG00000006773 ortholog_one2one 1 retrogene
retro_ogar_2339,
Vicugna pacos ENSVPAG00000001916 ortholog_one2one 1 retrogene
retro_vpac_566,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1252 52.89 73.29
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Download FASTA sequences of all ENSCPOG00000025988 retrocopies