Parental gene:

SYNJ2BP, ENSCPOG00000023967

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_20:14882516..14937437(-)


>ENSCPOG00000023967
ATGAACGGAAGAGTGGATTATTTGGTCACAGAGGAAGAGATCAATCTTACCAGAGGACCCTCAGGTCTGGGCTTCAACAT
CGTCGGTGGGACAGATCAGCAGTATGTCTCTAATGACAGTGGCATCTACGTCAGCAGCATCAAAGAGAACGGGGCTGCAG
CCCAGGATGGGCGACTCCAGGAGGGTGACAAGATCCTCTCGGTAAATGGCCACGACCTAAAGAACCTGCAGCACCGAGAT
GCTGTAGCCCTTTTCCGTAATGCTGGCTATGCTGTGTCCCTGAAAGTGCAACACAGGTTGCTGGTTGTTGGAGGTTCCTT
TGGTCTCCGTGAGTTCTCACAAATCCGATATGATGCTGTGAAGATTAAAGTTGATCCTGAATTGGAAAAAAAGCTGAAAA
TGAACAAAATATCTTTAGAGTCAGAATATGAGAAAATAAAAGACTCTACTTTTGAAGACTGGAAGAATATTCGCGGCCCA
AGGCCTTGGGAAGATCCTGATCTCCTTCAAGGACGAAATCCAGAAATCCTTAAGACTAAGACAACC

Library Parental gene expression (RPM)
SRP017611_liver 21 .76 RPM
SRP017611_kidney 22 .30 RPM
SRP017611_brain 11 .04 RPM
SRP040447_lung 12 .21 RPM
SRP040447_skeletal_muscle 11 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007586 ortholog_one2one 1 retrogene
retro_btau_1114,
Gorilla gorilla ENSGGOG00000014492 ortholog_one2one 1 retrogene
retro_ggor_1470,
Mus musculus ENSMUSG00000090935 possible_ortholog 3 retrogenes
retro_mmus_1428, retro_mmus_1538, retro_mmus_1802,
Oryctolagus cuniculus ENSOCUG00000008559 ortholog_one2one 1 retrogene
retro_ocun_885,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_836 89.62 57.69
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Download FASTA sequences of all ENSCPOG00000023967 retrocopies