Parental gene: | SSR2, ENSCPOG00000023729 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_10:16666919..16674130(-) |
>ENSCPOG00000023729
CCGAAGATGAGGCTGCTGGCATTTGTGACGTTAGTTCTATTAGCTGTCACTCGAGCAGAGGAAGGAGCCAGGCTTTTGGC
TTCCAAATCGCTGTTGAACAGATATGCTGTGGAAGGGCGGGACCTGACCTTACAGTACAACATCTACAATGTTGGCTCAA
GTGCTGCATTGGATGTGGAATTATCTGATGATTCCTTTCCCCCAGAGGACTTTGGCATTGTCTCTGGTATGCTGAATGTC
AAATGGGACCGTATTGCACCTGCTAGCAATGTCTCCCACACTGTGGTCCTGCGACCTCTCAAGGCTGGTTACTTCAACTT
CACCTCGGCAACTATCACCTATTTGGCCCAAGAGGATGGGCCTGTTGTGATTGGCTCTACCAGTGCACCTGGACAAGGAG
GAATCCTGGCTCAGCGGGAGTTTGATAGGAGATTCTCCCCTCACTTTCTGGACTGGGCAGCCTTCGGAGTCATGACCCTT
CCCTCTATCGGCATCCCCCTGCTCTTGTGGTACTCCAGCAAGAGGAAATACGACACGCCCAAAACCAAGAAGAAC
CCGAAGATGAGGCTGCTGGCATTTGTGACGTTAGTTCTATTAGCTGTCACTCGAGCAGAGGAAGGAGCCAGGCTTTTGGC
TTCCAAATCGCTGTTGAACAGATATGCTGTGGAAGGGCGGGACCTGACCTTACAGTACAACATCTACAATGTTGGCTCAA
GTGCTGCATTGGATGTGGAATTATCTGATGATTCCTTTCCCCCAGAGGACTTTGGCATTGTCTCTGGTATGCTGAATGTC
AAATGGGACCGTATTGCACCTGCTAGCAATGTCTCCCACACTGTGGTCCTGCGACCTCTCAAGGCTGGTTACTTCAACTT
CACCTCGGCAACTATCACCTATTTGGCCCAAGAGGATGGGCCTGTTGTGATTGGCTCTACCAGTGCACCTGGACAAGGAG
GAATCCTGGCTCAGCGGGAGTTTGATAGGAGATTCTCCCCTCACTTTCTGGACTGGGCAGCCTTCGGAGTCATGACCCTT
CCCTCTATCGGCATCCCCCTGCTCTTGTGGTACTCCAGCAAGAGGAAATACGACACGCCCAAAACCAAGAAGAAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 50 .06 RPM |
| SRP017611_kidney | 54 .54 RPM |
| SRP017611_brain | 24 .67 RPM |
| SRP040447_lung | 100 .18 RPM |
| SRP040447_skeletal_muscle | 35 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001212 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012304 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000028971 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_478 | 66.92 | 69.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000023729 retrocopies