Parental gene: | LYRM2, ENSCPOG00000015625 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_49:3300880..3302489(-) |
>ENSCPOG00000015625
ATGGCCGCCTCCCGCTTACCTCCAGGCACGCTGACACTAAAGCAGTTCCTGAGGAGGCAACAAGTTCTCCTTCTTTATAG
AAGGATTTTGCAAGCTATCAGGCAAGTTCCAAATGCATGTGATCGCAAATACCTGCAGAACTGGGCAAGGGAAGAATTCA
AACGAAATAAAAGCGCCACGGAAGAGGATACTATCCAGATGATGATTACTCAAGGCAATATCCAGCTAAAGGAGTTAGAA
AAAACACTTGCATTAGCAAAATCT
ATGGCCGCCTCCCGCTTACCTCCAGGCACGCTGACACTAAAGCAGTTCCTGAGGAGGCAACAAGTTCTCCTTCTTTATAG
AAGGATTTTGCAAGCTATCAGGCAAGTTCCAAATGCATGTGATCGCAAATACCTGCAGAACTGGGCAAGGGAAGAATTCA
AACGAAATAAAAGCGCCACGGAAGAGGATACTATCCAGATGATGATTACTCAAGGCAATATCCAGCTAAAGGAGTTAGAA
AAAACACTTGCATTAGCAAAATCT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .96 RPM |
| SRP017611_kidney | 6 .91 RPM |
| SRP017611_brain | 7 .13 RPM |
| SRP040447_lung | 3 .76 RPM |
| SRP040447_skeletal_muscle | 9 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000000905 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000083099 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000009916 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_925 | 76.14 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_946 | 78.41 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cpor_1169 | 79.01 | 92.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cpor_1223 | 77.78 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000015625 retrocopies