Parental gene: | BMI1, ENSCPOG00000015427 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_91:3198136..3201499(-) |
>ENSCPOG00000015427
ATGCATCGAACAACCAGAATCAAGATCACTGAGCTAAATCCTCACCTAATGTGTGTGCTTTGTGGAGGGTACTTCATTGA
TGCCACAACTATAATAGAATGTCTACATTCCTTCTGTAAAACGTGTATTGTGCGTTACCTGGAGACCAGCAAGTATTGTC
CTATCTGTGATGTCCAAGTTCACAAAACCAGACCATTACTGAATATAAGGTCAGATAAAACACTTCAAGATATCGTATAC
AAATTAGTTCCAGGGCTTTTCAAAAATGAAATGAAGAGAAGAAGGGATTTTTATGCAGCTCATCCTTCAGCTGATGCTGC
CAATGGCTCTAATGAAGATAGAGGAGAAGTTGCAGATGAAGAGAAGAGAATTATAACTGATGATGAGATAATAAGCTTAT
CTATTGAATTCTTTGACCAGAACAGATTGGATCGGAAAGTAAACAAAGACAAAGAGAAGTCTAAGGAGGAGGTGAATGAT
AAAAGATATTTACGATGCCCAGCAGCAATGACTGTGATGCACTTAAGAAAGTTTCTCAGAAGTAAAATGGACATACCTAA
TACTTTCCAGATCGATGTCATGTATGAAGAGGAACCTTTAAAGGATTACTATACACTAATGGACATTGCCTACATTTATA
CCTGGAGAAGGAATGGTCCACTTCCTTTGAAATACAGAGTTCGACCTACTTGTAAGAGAATGAAGATCAGTCACCAGAGA
GATGGACTGACAAATGCTGGAGAACTGGAAAGTGACTCTGGGAGTGACAAGGCCAACAGCCCAGCAGGAGGTATTCCCTC
CACCTCTTCTTGTTTGCCCAGCCCCAGTACTCCAGTGCAGTCTCCTCATCCACAGTTTCCTCACATTTCCAGTACCATGA
ATGGAACCAGCAACAGCCCCAGCGGTAACCACCAATCTTCCTTTGCCAATAGACCTCGGAAATCATCAGTAAATGGGTCA
TCAGCAACGTCATCTGGTTGA
ATGCATCGAACAACCAGAATCAAGATCACTGAGCTAAATCCTCACCTAATGTGTGTGCTTTGTGGAGGGTACTTCATTGA
TGCCACAACTATAATAGAATGTCTACATTCCTTCTGTAAAACGTGTATTGTGCGTTACCTGGAGACCAGCAAGTATTGTC
CTATCTGTGATGTCCAAGTTCACAAAACCAGACCATTACTGAATATAAGGTCAGATAAAACACTTCAAGATATCGTATAC
AAATTAGTTCCAGGGCTTTTCAAAAATGAAATGAAGAGAAGAAGGGATTTTTATGCAGCTCATCCTTCAGCTGATGCTGC
CAATGGCTCTAATGAAGATAGAGGAGAAGTTGCAGATGAAGAGAAGAGAATTATAACTGATGATGAGATAATAAGCTTAT
CTATTGAATTCTTTGACCAGAACAGATTGGATCGGAAAGTAAACAAAGACAAAGAGAAGTCTAAGGAGGAGGTGAATGAT
AAAAGATATTTACGATGCCCAGCAGCAATGACTGTGATGCACTTAAGAAAGTTTCTCAGAAGTAAAATGGACATACCTAA
TACTTTCCAGATCGATGTCATGTATGAAGAGGAACCTTTAAAGGATTACTATACACTAATGGACATTGCCTACATTTATA
CCTGGAGAAGGAATGGTCCACTTCCTTTGAAATACAGAGTTCGACCTACTTGTAAGAGAATGAAGATCAGTCACCAGAGA
GATGGACTGACAAATGCTGGAGAACTGGAAAGTGACTCTGGGAGTGACAAGGCCAACAGCCCAGCAGGAGGTATTCCCTC
CACCTCTTCTTGTTTGCCCAGCCCCAGTACTCCAGTGCAGTCTCCTCATCCACAGTTTCCTCACATTTCCAGTACCATGA
ATGGAACCAGCAACAGCCCCAGCGGTAACCACCAATCTTCCTTTGCCAATAGACCTCGGAAATCATCAGTAAATGGGTCA
TCAGCAACGTCATCTGGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 12 .45 RPM |
| SRP017611_kidney | 17 .80 RPM |
| SRP017611_brain | 28 .01 RPM |
| SRP040447_lung | 23 .96 RPM |
| SRP040447_skeletal_muscle | 21 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000011962 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000036548 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000025243 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000016845 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000000881 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000026739 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005420 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015631 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_546 | 76.57 | 72.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_1209 | 75.00 | 72.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000015427 retrocopies