Parental gene: | GPKOW, ENSCPOG00000013270 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_132:2381599..2389402(-) |
>ENSCPOG00000013270
GCCGAAGAGGAGGTTTCCGAGCCGGCTACCCTTTCCGCAGCCCCAGTTTCATTTGGCTTCACTCGCACCTCTGTCCGGAG
GCGACTGGCGGATAAAGCAGACGGCACAGGGTCGGCCCCAGAGGAGAAGGATTTCTTGAAGGTCGTGGAAGGCAGAGAGC
TGCAGAGTGTGAAGCCCTTAGAAGCCCCTAAGGAACTGGTCATCCCATTGATCCAGAGTGGCTTCCGAAGGCAGCCCTTG
GCCCAGACGCCTATGCCATCCGTAGAGGCTTTGGGGGATGGGGTGCTGTCCCAGGCTGTGAAGGAGCTCATTGAGGAATC
CAAGAAGTCTCTGGAAGAGAGAGAGAATGCGGGTGTTGACCCCTCGCTTGCTATCCCCATGATCCAGAAAGGATGCATCC
CCGGAGAGGAGGGGGCAGACAGCACACCCCGGGCTGAGACAGTGCCAGAGGAGGCTGATTATGAGGCTGTCCCTGTGGAG
GCCTACGGGCTGGCCATGCTGCGGGGTATGGGCTGGAAACCTGGTGAGGGCATTGGCCGCACTTTCAATCAAGTGGTGAA
ACCCCGTGTGAACTTGCTGAGGCCCAAGGGGCTAGGGCTGGGTGCCAGCTTGACAGAGGCCCAGGCCTTGCCCTCCAGTG
GCTCCTACTGCCCCCCAAAGCCAGGTGGGGAACAAAAGAAGGGTAAGGAAGACCAACCACAAGGGCTGGTGCCTGGCAGA
ACCGTGGTGGTCCTTTCTGGCCCTCATCGAGGCCTCTACGGGAAGGTGGAGGGCCTTGATCCTGACAATGTTCGGGCCAT
GGTTCGTCTAGCACTGGGCAGTCGCATGGTGACTGTTAGTGAATACTGTTTGAGACCTGTGTCTCAACAGGAGTTTGACA
AGAACTTGCATTCTGACAAAATAGGCCAGGCAAGCAGAACTTCCTTGGGGCAACACAATGGCTCATCCTTGTCACGGAAG
GCCCACCAGAGTGAAGACCTCCGAGGCCGGCAGGAGGACCCAGAGAAGAAGCGGAAACACCCTCCAGACCGACAGGACGG
GCCTGTGGCCAAGAGTGAGAAAGCAGCCAGCAGGAGTCAGCACTGGCTGCACAGAGACCTGCGTGTGCGTTTTGTGGACA
AGCTGTACAAGGGCGGCCAGTATTACAACACCAAGATGACGATTGAAGATGTCCTGAGCCCAGATACATGTGTATGCCGG
ACAGATAAAGGCCAAGTGCTGGAAGGCCTCAGGGAAGACATGCTGGAGACTCTAGTTCCCAAGGTCGAGGGCGATCGTGT
GATGGTGGTGCTGGGGCCACAGGCTGGAAGGGTGGGCCATCTGTTGGGCCGGGACAGAGCCCATAACCGGGCATTGGTGC
AGCTGCAGAGAGAGAATCAGTTGGTGGAACTTCACTATGACGCCGTCTGCCAGTTTATGGGCCCCATTGACTTCGATGAA
GACTGA
GCCGAAGAGGAGGTTTCCGAGCCGGCTACCCTTTCCGCAGCCCCAGTTTCATTTGGCTTCACTCGCACCTCTGTCCGGAG
GCGACTGGCGGATAAAGCAGACGGCACAGGGTCGGCCCCAGAGGAGAAGGATTTCTTGAAGGTCGTGGAAGGCAGAGAGC
TGCAGAGTGTGAAGCCCTTAGAAGCCCCTAAGGAACTGGTCATCCCATTGATCCAGAGTGGCTTCCGAAGGCAGCCCTTG
GCCCAGACGCCTATGCCATCCGTAGAGGCTTTGGGGGATGGGGTGCTGTCCCAGGCTGTGAAGGAGCTCATTGAGGAATC
CAAGAAGTCTCTGGAAGAGAGAGAGAATGCGGGTGTTGACCCCTCGCTTGCTATCCCCATGATCCAGAAAGGATGCATCC
CCGGAGAGGAGGGGGCAGACAGCACACCCCGGGCTGAGACAGTGCCAGAGGAGGCTGATTATGAGGCTGTCCCTGTGGAG
GCCTACGGGCTGGCCATGCTGCGGGGTATGGGCTGGAAACCTGGTGAGGGCATTGGCCGCACTTTCAATCAAGTGGTGAA
ACCCCGTGTGAACTTGCTGAGGCCCAAGGGGCTAGGGCTGGGTGCCAGCTTGACAGAGGCCCAGGCCTTGCCCTCCAGTG
GCTCCTACTGCCCCCCAAAGCCAGGTGGGGAACAAAAGAAGGGTAAGGAAGACCAACCACAAGGGCTGGTGCCTGGCAGA
ACCGTGGTGGTCCTTTCTGGCCCTCATCGAGGCCTCTACGGGAAGGTGGAGGGCCTTGATCCTGACAATGTTCGGGCCAT
GGTTCGTCTAGCACTGGGCAGTCGCATGGTGACTGTTAGTGAATACTGTTTGAGACCTGTGTCTCAACAGGAGTTTGACA
AGAACTTGCATTCTGACAAAATAGGCCAGGCAAGCAGAACTTCCTTGGGGCAACACAATGGCTCATCCTTGTCACGGAAG
GCCCACCAGAGTGAAGACCTCCGAGGCCGGCAGGAGGACCCAGAGAAGAAGCGGAAACACCCTCCAGACCGACAGGACGG
GCCTGTGGCCAAGAGTGAGAAAGCAGCCAGCAGGAGTCAGCACTGGCTGCACAGAGACCTGCGTGTGCGTTTTGTGGACA
AGCTGTACAAGGGCGGCCAGTATTACAACACCAAGATGACGATTGAAGATGTCCTGAGCCCAGATACATGTGTATGCCGG
ACAGATAAAGGCCAAGTGCTGGAAGGCCTCAGGGAAGACATGCTGGAGACTCTAGTTCCCAAGGTCGAGGGCGATCGTGT
GATGGTGGTGCTGGGGCCACAGGCTGGAAGGGTGGGCCATCTGTTGGGCCGGGACAGAGCCCATAACCGGGCATTGGTGC
AGCTGCAGAGAGAGAATCAGTTGGTGGAACTTCACTATGACGCCGTCTGCCAGTTTATGGGCCCCATTGACTTCGATGAA
GACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 17 .89 RPM |
| SRP017611_kidney | 25 .02 RPM |
| SRP017611_brain | 29 .97 RPM |
| SRP040447_lung | 30 .29 RPM |
| SRP040447_skeletal_muscle | 12 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000003818 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000031148 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_148 | 66.46 | 65.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_725 | 57.94 | 51.98 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000013270 retrocopies