Parental gene: | ZNF131, ENSCPOG00000011858 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_29:13825565..13855815(-) |
>ENSCPOG00000011858
ATGGAGGCTGAAGAGACGATGGAATGCCTTCAGGAGTTCCCTGAACATCACAAAATGATCTTGGACCGATTGAATGAGCA
GCGAGAGCAGGACCGCTTTACCGATATCACCCTGATTGTGGACGCTAACTTAGGGCACCATTTTAAGGCCCACAAGGCTG
TTTTAGCTGCTTGCAGTAAGTTCTTCTACAAATTCTTTCAAGAGTTTACTCAGGAACCTTTGGTGGAAATAGAAGGTGTT
AGTAAAATGGCCTTTCGTCATTTAATTGAGTTCACATATACAGCAAAATTAATGATACAAGGAGAGGAAGAAGCCAATGA
TGTATGGAAAGCAGCAGAGTTTCTACAAATGCTAGAAGCTATCAAAGCCCTCGAAGTCAGAAACAAGGAAAACTCCGCTC
CTTTAGAGGAAAATACCACAAGAAAGATTGCAGAAACTTCGAATGTTATCACTGAGTCATTGCCATCTGCAGAATCAGAA
CCTGTGGAAATTGAGGTGGAGATTGCTGAAGGTACAATTGAAGTGGAAGATGAAGGCATGGAAACATTAGAGGAAGTAGT
TTCTACCAAGCAGTCCATAAAGTACATTCAGAGCACAGGTTCTTCTGACGATTCTGCTCTGGCGTTGTTGGCAGATATTA
CCAGCAAATACCGTCAAGGTGATAGAAAAGGGCAGATTAAAGATGAAGATGGCTGTGCATCTGACCCCATAAACAAACAG
GAACACATGAAATCACACTCCACTGAGAGTTTCAAGTGTGAGATATGCAATAAAAGGTATCTTCGGGAGAGTGCATGGAA
ACAACACCTAAATTGTTACCACCTTGAAGAAGGTGGGGTCAGTAAGAAGCAAAGAACTGGGAAAAAAATTCACATATGTC
AGTATTGTGAGAAACAGTTTGATCACTTTGGACATTTTAAAGAGCATCTTCGAAAACATACAGGTGAAAAACCTTTTGAG
TGTCCAAATTGTCATGAACGGTTTGCTAGAAATAGCACTCTGAAATGTCACCTTACTGCTTGCCAAACCGGAGTGGGAGC
AAAAAAAGGGAGGAAGAAGCTTTACGAATGTCAGGTCTGTAACAGTGTGTTTAATAGTTGGGACCAATTCAAAGATCACT
TGGTAATACATACTGGGGATAAACCCAACCATTGCACTCTGTGTGACTTGTGGTTTATGCAAGGAAATGAATTTAGGAGG
CATCTGAATGAATCTCACAACATTTCAGAACGTCTGATAACTGAAGAAGTCCTTTCAGTAGAAACACGAGTGCAAACTGA
ACCAGTGACATCAATGACTATTATAGAACAGGTTGGGAAGGTGCATATGTTACCACTGCTTCAAGTTCAGGTGGATTCGG
CACAAGTGACTGTGGAACAAGTCCATCCAGATCTGCTCCAGGATGGCCAAGTACATGATTCACACATGAGTGAGCTTCCA
GAGCAGGTCCAAGTGAGCTATCTAGAAGTGGGTCGAATTCAGACTGAAGAAGGCACGGAAGTACATGTCGAGGAGTTGCA
TGTTGAACGGGTAAATCAGATGCCAGTGGAAGTACAAACTGAGCTTTTGGAAGCAGACTTGGATCACGTGACCCCTGGAA
TCATGAACCAAGAGGAGAGTGAGCCTAACCAAGCAGATGGTACTGAGACTGCTGGGGAAGATCTGGAAGGTGCTGAGGGT
TTAAAGACCAAACCAACAGTGGATTCCCAAGCTGAAAAGACAGAGAGTGAAGACAGAACAGCTATGCCAGTCTTAGAATG
A
ATGGAGGCTGAAGAGACGATGGAATGCCTTCAGGAGTTCCCTGAACATCACAAAATGATCTTGGACCGATTGAATGAGCA
GCGAGAGCAGGACCGCTTTACCGATATCACCCTGATTGTGGACGCTAACTTAGGGCACCATTTTAAGGCCCACAAGGCTG
TTTTAGCTGCTTGCAGTAAGTTCTTCTACAAATTCTTTCAAGAGTTTACTCAGGAACCTTTGGTGGAAATAGAAGGTGTT
AGTAAAATGGCCTTTCGTCATTTAATTGAGTTCACATATACAGCAAAATTAATGATACAAGGAGAGGAAGAAGCCAATGA
TGTATGGAAAGCAGCAGAGTTTCTACAAATGCTAGAAGCTATCAAAGCCCTCGAAGTCAGAAACAAGGAAAACTCCGCTC
CTTTAGAGGAAAATACCACAAGAAAGATTGCAGAAACTTCGAATGTTATCACTGAGTCATTGCCATCTGCAGAATCAGAA
CCTGTGGAAATTGAGGTGGAGATTGCTGAAGGTACAATTGAAGTGGAAGATGAAGGCATGGAAACATTAGAGGAAGTAGT
TTCTACCAAGCAGTCCATAAAGTACATTCAGAGCACAGGTTCTTCTGACGATTCTGCTCTGGCGTTGTTGGCAGATATTA
CCAGCAAATACCGTCAAGGTGATAGAAAAGGGCAGATTAAAGATGAAGATGGCTGTGCATCTGACCCCATAAACAAACAG
GAACACATGAAATCACACTCCACTGAGAGTTTCAAGTGTGAGATATGCAATAAAAGGTATCTTCGGGAGAGTGCATGGAA
ACAACACCTAAATTGTTACCACCTTGAAGAAGGTGGGGTCAGTAAGAAGCAAAGAACTGGGAAAAAAATTCACATATGTC
AGTATTGTGAGAAACAGTTTGATCACTTTGGACATTTTAAAGAGCATCTTCGAAAACATACAGGTGAAAAACCTTTTGAG
TGTCCAAATTGTCATGAACGGTTTGCTAGAAATAGCACTCTGAAATGTCACCTTACTGCTTGCCAAACCGGAGTGGGAGC
AAAAAAAGGGAGGAAGAAGCTTTACGAATGTCAGGTCTGTAACAGTGTGTTTAATAGTTGGGACCAATTCAAAGATCACT
TGGTAATACATACTGGGGATAAACCCAACCATTGCACTCTGTGTGACTTGTGGTTTATGCAAGGAAATGAATTTAGGAGG
CATCTGAATGAATCTCACAACATTTCAGAACGTCTGATAACTGAAGAAGTCCTTTCAGTAGAAACACGAGTGCAAACTGA
ACCAGTGACATCAATGACTATTATAGAACAGGTTGGGAAGGTGCATATGTTACCACTGCTTCAAGTTCAGGTGGATTCGG
CACAAGTGACTGTGGAACAAGTCCATCCAGATCTGCTCCAGGATGGCCAAGTACATGATTCACACATGAGTGAGCTTCCA
GAGCAGGTCCAAGTGAGCTATCTAGAAGTGGGTCGAATTCAGACTGAAGAAGGCACGGAAGTACATGTCGAGGAGTTGCA
TGTTGAACGGGTAAATCAGATGCCAGTGGAAGTACAAACTGAGCTTTTGGAAGCAGACTTGGATCACGTGACCCCTGGAA
TCATGAACCAAGAGGAGAGTGAGCCTAACCAAGCAGATGGTACTGAGACTGCTGGGGAAGATCTGGAAGGTGCTGAGGGT
TTAAAGACCAAACCAACAGTGGATTCCCAAGCTGAAAAGACAGAGAGTGAAGACAGAACAGCTATGCCAGTCTTAGAATG
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .36 RPM |
| SRP017611_kidney | 10 .68 RPM |
| SRP017611_brain | 11 .04 RPM |
| SRP040447_lung | 14 .20 RPM |
| SRP040447_skeletal_muscle | 6 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001280 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002252 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000015383 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009644 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_350 | 80.79 | 76.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000011858 retrocopies