Parental gene: | PDK1, ENSCPOG00000008434 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_3:17294654..17328055(-) |
>ENSCPOG00000008434
ATGAAGCTTACGCGTTTGCTGCGCGGGGCTGCCTCGGCCCGTCCGGGGCCTGGGCCGCGCGCCACCCACCCCAGCGCCAG
CCGCAGCCTCGCCTCAGACTCGGGCACCGGGCCTGCGTCGGACCGAAGCGTACCGGGCCAGGTGGACTTCTACGCGCGCT
TCTCGCCGTCGCCGCTCTCCATGAAGCAGTTCTTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTT
CTTCGGCAAGAGTTGCCTGTTAGATTGGCAAATATAATGAAGGAAATAAGTCTCCTTCCAGATAATCTTCTCAGGACGCC
ATCTGTTCAACTGGTACAAAGCTGGTATATCCAGAGCCTTCAAGAGCTTCTTGATTTTAAGGATAAAAGTGCTGAAGATG
CTAAAGCTATTTACGACTTTACAGATACTGTGATACGAATCCGAAACCGACACAATGATGTCATTCCTACCATGGCCCAG
GGTGTGATTGAATACAAGGAGAGCTTCGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGATCGATTCTA
TATGAGTCGCATTTCAATTAGAATGCTACTCAATCAGCATTCTTTATTGTTTGGGGGAAAAGGAAGTCCATCTCATCGAA
AACACATTGGCAGCATAAATCCAAACTGTGATGTAGTTGAAGTTATTAAAGATGGCTATGAAAATGCTAGGCGTCTGTGT
GATTTGTATTATATTAACTCTCCTGAACTAGAACTTGAAGAACTAAATGCAAAATCACCAGGACAACCAATACAAGTGGT
TTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTTTCAAGAACGCAATGAGAGCAACTATGGAACATCATGCAG
ACAAAGGTGTTTACCCCCCTATTCAAGTTCATGTCACACTGGGTAACGAGGATTTGACTGTGAAGATGAGTGACCGAGGA
GGTGGCGTCCCTTTAAGGAAGATTGACAGACTCTTCAACTACATGTATTCAACTGCGCCACGGCCACGTGTGGAGACTTC
CCGAGCAGCACCCCTGGCTGGTTTTGGTTATGGGTTGCCCATATCACGTCTGTATGCACAGTACTTCCAAGGGGACCTGA
AGCTATATTCCTTGGAGGGCTACGGCACAGATGCTGTTATCTACATTAAGGCTCTGTCAACAGAATCAATTGAGAGACTC
CCAGTGTATAACAAAGCTGCCTGGAAGCATTATAATACCAACCATGAGGCTGATGACTGGTGTGTCCCCAGCAGAGAGCC
AAAGGACATGACAACATTCCGTAGCGCCTGA
ATGAAGCTTACGCGTTTGCTGCGCGGGGCTGCCTCGGCCCGTCCGGGGCCTGGGCCGCGCGCCACCCACCCCAGCGCCAG
CCGCAGCCTCGCCTCAGACTCGGGCACCGGGCCTGCGTCGGACCGAAGCGTACCGGGCCAGGTGGACTTCTACGCGCGCT
TCTCGCCGTCGCCGCTCTCCATGAAGCAGTTCTTGGACTTCGGATCAGTGAATGCTTGTGAAAAGACCTCATTTATGTTT
CTTCGGCAAGAGTTGCCTGTTAGATTGGCAAATATAATGAAGGAAATAAGTCTCCTTCCAGATAATCTTCTCAGGACGCC
ATCTGTTCAACTGGTACAAAGCTGGTATATCCAGAGCCTTCAAGAGCTTCTTGATTTTAAGGATAAAAGTGCTGAAGATG
CTAAAGCTATTTACGACTTTACAGATACTGTGATACGAATCCGAAACCGACACAATGATGTCATTCCTACCATGGCCCAG
GGTGTGATTGAATACAAGGAGAGCTTCGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGATCGATTCTA
TATGAGTCGCATTTCAATTAGAATGCTACTCAATCAGCATTCTTTATTGTTTGGGGGAAAAGGAAGTCCATCTCATCGAA
AACACATTGGCAGCATAAATCCAAACTGTGATGTAGTTGAAGTTATTAAAGATGGCTATGAAAATGCTAGGCGTCTGTGT
GATTTGTATTATATTAACTCTCCTGAACTAGAACTTGAAGAACTAAATGCAAAATCACCAGGACAACCAATACAAGTGGT
TTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTTTCAAGAACGCAATGAGAGCAACTATGGAACATCATGCAG
ACAAAGGTGTTTACCCCCCTATTCAAGTTCATGTCACACTGGGTAACGAGGATTTGACTGTGAAGATGAGTGACCGAGGA
GGTGGCGTCCCTTTAAGGAAGATTGACAGACTCTTCAACTACATGTATTCAACTGCGCCACGGCCACGTGTGGAGACTTC
CCGAGCAGCACCCCTGGCTGGTTTTGGTTATGGGTTGCCCATATCACGTCTGTATGCACAGTACTTCCAAGGGGACCTGA
AGCTATATTCCTTGGAGGGCTACGGCACAGATGCTGTTATCTACATTAAGGCTCTGTCAACAGAATCAATTGAGAGACTC
CCAGTGTATAACAAAGCTGCCTGGAAGCATTATAATACCAACCATGAGGCTGATGACTGGTGTGTCCCCAGCAGAGAGCC
AAAGGACATGACAACATTCCGTAGCGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 18 .54 RPM |
| SRP017611_kidney | 25 .54 RPM |
| SRP017611_brain | 30 .08 RPM |
| SRP040447_lung | 16 .02 RPM |
| SRP040447_skeletal_muscle | 15 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007507 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022553 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009035 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014761 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_545 | 68.73 | 58.03 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000008434 retrocopies