Parental gene: | TMEM106C, ENSCPOG00000008335 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_9:51860722..51864790(-) |
>ENSCPOG00000008335
ATGGGGTCTCAGCATTCTGCCTCTGCTCGCCTTCCCTCCTCCAAGCGAAAGAAAGATGACAGGGAGGCTTTCCTGGCTGA
TCCTGAGCAAGAAGAAGCCATCGCCCAGTTTCCATATGTGGAGTTCACGGGGAGAGATAGCATCACCTGTCTCACCTGCC
AGGGGACAGGCTACATCCCAACAGAGCAAGTCAATGAATTGGTAGCTTTGATCCCACACAGTGATCAGAGGTTGCGCCCT
CAGAGAACTAAACAGTATGTCCTTCTGTCGGTCCTGCTGTGCCTCCTGGCATCTGGTTTGGTGGTTTTCTTCCTGTTTCC
GCATTCAGTCCTTGTGAACGATGATGGCATCAAGGTGGTGAAAGTCACATTTAACAAGCGCGACTCCCTTGTCATCCTCG
CCATCACGGCCACCCTGAAAATCCGGAACTCCAACTTCTACCCAGTTTCAGTGACCAGCCTGTCCAGCCAGGTTCAGTAC
ATGAACACAGTGGTTGGCACATATATGACCACGAATGTCTCCCTCATTCTGCCGCGAAGCGAGCAGCAGGTGAATTTTAC
GGCAAAGGCTGAGATGGGAGGACCGTATTCCTATGTGTACTTCTTCTGCACAGTGCCTCATATTCTGGTGCACAACATAG
TGATCTTCATGCGAACTTCAGTGAAGATTTCATACATTGGCCTCACGACCCAGAGCTCCTTGGAGACACATCACTACGTG
GACTGTGGCGCAAATTCTACAACTGTT
ATGGGGTCTCAGCATTCTGCCTCTGCTCGCCTTCCCTCCTCCAAGCGAAAGAAAGATGACAGGGAGGCTTTCCTGGCTGA
TCCTGAGCAAGAAGAAGCCATCGCCCAGTTTCCATATGTGGAGTTCACGGGGAGAGATAGCATCACCTGTCTCACCTGCC
AGGGGACAGGCTACATCCCAACAGAGCAAGTCAATGAATTGGTAGCTTTGATCCCACACAGTGATCAGAGGTTGCGCCCT
CAGAGAACTAAACAGTATGTCCTTCTGTCGGTCCTGCTGTGCCTCCTGGCATCTGGTTTGGTGGTTTTCTTCCTGTTTCC
GCATTCAGTCCTTGTGAACGATGATGGCATCAAGGTGGTGAAAGTCACATTTAACAAGCGCGACTCCCTTGTCATCCTCG
CCATCACGGCCACCCTGAAAATCCGGAACTCCAACTTCTACCCAGTTTCAGTGACCAGCCTGTCCAGCCAGGTTCAGTAC
ATGAACACAGTGGTTGGCACATATATGACCACGAATGTCTCCCTCATTCTGCCGCGAAGCGAGCAGCAGGTGAATTTTAC
GGCAAAGGCTGAGATGGGAGGACCGTATTCCTATGTGTACTTCTTCTGCACAGTGCCTCATATTCTGGTGCACAACATAG
TGATCTTCATGCGAACTTCAGTGAAGATTTCATACATTGGCCTCACGACCCAGAGCTCCTTGGAGACACATCACTACGTG
GACTGTGGCGCAAATTCTACAACTGTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 26 .73 RPM |
| SRP017611_kidney | 62 .81 RPM |
| SRP017611_brain | 20 .19 RPM |
| SRP040447_lung | 25 .83 RPM |
| SRP040447_skeletal_muscle | 5 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000020351 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000010370 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017734 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000014352 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000028397 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001184 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1124 | 76.76 | 72.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000008335 retrocopies