Parental gene: | RNF141, ENSCPOG00000007808 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_67:1399890..1416701(-) |
>ENSCPOG00000007808
ATGGGACAGCAAATTTCAGATCAGACGCAACTGGTTATTAACAAGTTACCAGAAAAAGTAGCAAAACATGTAACATTGAT
TCGAGAAAGTAGCTCCCTAACTTACGAAGAATTTCTTGGGAGAGTAGCTGAACTCAATGATGTAACGGCTAAAATAGCTG
CTGGCCAGGAGAAACATCTTCTCTTTGAGGTACAGCCTGGTTCTGATTCCTCTGCCTTGTGGAAGGTGGTCGTACGGGTG
GTCTGTACCAAGATTAACAAAAGCAGTGGCATTGTAGAAGCATCACGGATCATGAATTTGTACCAGTTCATTCAGCTTTA
TAAAGACATGACAAGTCAAGCGGCAGAAGTGTTGGCTCAGAGCTGCACCTCTGAGGAGCCCGATGAAAACTCATCTTCTG
TAACTTCTTGTCAGGCTAGCCTTTGGATGGGAAGGGTGAAGCAGCTGACTGATGAGGAGGAGTGTTGCATCTGCATGGAT
GGACGAGCTGACCTCATCCTGCCTTGTGCTCACAACTTTTGCCAGAAGTGTATTGATAAGTGGAGTGACCGACACAGAAA
CTGCCCTATCTGTCGCCTGCAGATGACTGGAGCAAATGAATCTTGGGTAGTGTCGGACGCACCCACAGAGGACGACATGG
CTAACTACATTCTTAACATGGCTGATGAGGCAGGCCAGCCCCACAGGCCATGA
ATGGGACAGCAAATTTCAGATCAGACGCAACTGGTTATTAACAAGTTACCAGAAAAAGTAGCAAAACATGTAACATTGAT
TCGAGAAAGTAGCTCCCTAACTTACGAAGAATTTCTTGGGAGAGTAGCTGAACTCAATGATGTAACGGCTAAAATAGCTG
CTGGCCAGGAGAAACATCTTCTCTTTGAGGTACAGCCTGGTTCTGATTCCTCTGCCTTGTGGAAGGTGGTCGTACGGGTG
GTCTGTACCAAGATTAACAAAAGCAGTGGCATTGTAGAAGCATCACGGATCATGAATTTGTACCAGTTCATTCAGCTTTA
TAAAGACATGACAAGTCAAGCGGCAGAAGTGTTGGCTCAGAGCTGCACCTCTGAGGAGCCCGATGAAAACTCATCTTCTG
TAACTTCTTGTCAGGCTAGCCTTTGGATGGGAAGGGTGAAGCAGCTGACTGATGAGGAGGAGTGTTGCATCTGCATGGAT
GGACGAGCTGACCTCATCCTGCCTTGTGCTCACAACTTTTGCCAGAAGTGTATTGATAAGTGGAGTGACCGACACAGAAA
CTGCCCTATCTGTCGCCTGCAGATGACTGGAGCAAATGAATCTTGGGTAGTGTCGGACGCACCCACAGAGGACGACATGG
CTAACTACATTCTTAACATGGCTGATGAGGCAGGCCAGCCCCACAGGCCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .14 RPM |
| SRP017611_kidney | 18 .53 RPM |
| SRP017611_brain | 19 .33 RPM |
| SRP040447_lung | 18 .99 RPM |
| SRP040447_skeletal_muscle | 7 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011014 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014558 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000030788 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002807 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001765 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000002101 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000019740 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_175 | 72.87 | 54.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_198 | 58.75 | 68.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000007808 retrocopies