Parental gene:

CNIH4, ENSCPOG00000007310

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_13:163405..178269(-)


>ENSCPOG00000007310
ATGGAGGCGGTGGTGTTCGTCTTTTCTCTGTTGGACTGCTGCGCGCTAATCTTCCTCTCCGTGTACTTCATTATTACATT
GTCTGATTTAGAATGTGATTATATTAATGCTAGATCATGTTGCTCAAAATTAAACAAGTGGGTAATTCCAGAAATGATCG
GCCATTCGATTGTCAGCGTATTGATGCTTGTCTCACTGCACTGGTTTATCTTCCTTCTCAACTTACCTGTTGCCACTTGG
AATATATATCGGTTCATTATGGTGCCAAGTGGCAACATGGGAGTGTTTGACCCAACAGAAATACACAATCGAGGGCAGCT
GAAGTCACACATGAAAGAAGCCATGATCAAACTTGGTTTCCACTTGCTTTGTTTCTTCATGTATCTTTATAGTATGATTT
TAGCTTTGATAAATGAC

Library Parental gene expression (RPM)
SRP017611_liver 14 .49 RPM
SRP017611_kidney 11 .72 RPM
SRP017611_brain 4 .54 RPM
SRP040447_lung 13 .67 RPM
SRP040447_skeletal_muscle 9 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006544 ortholog_one2one 1 retrogene
retro_chof_327,
Callithrix jacchus ENSCJAG00000008013 ortholog_one2one 1 retrogene
retro_cjac_2474,
Dasypus novemcinctus ENSDNOG00000007093 ortholog_one2one 1 retrogene
retro_dnov_1669,
Homo sapiens ENSG00000143771 ortholog_one2one 1 retrogene
retro_hsap_3656,
Gorilla gorilla ENSGGOG00000005708 ortholog_one2one 1 retrogene
retro_ggor_2470,
Myotis lucifugus ENSMLUG00000003134 ortholog_one2one 1 retrogene
retro_mluc_1314,
Macaca mulatta ENSMMUG00000009936 ortholog_one2one 1 retrogene
retro_mmul_1796,
Nomascus leucogenys ENSNLEG00000013549 ortholog_one2one 1 retrogene
retro_nleu_514,
Ochotona princeps ENSOPRG00000001589 ortholog_one2one 1 retrogene
retro_opri_749,
Pongo abelii ENSPPYG00000000183 ortholog_one2one 1 retrogene
retro_pabe_3003,
Pan troglodytes ENSPTRG00000002025 ortholog_one2one 1 retrogene
retro_ptro_2481,
Pteropus vampyrus ENSPVAG00000014034 ortholog_one2one 1 retrogene
retro_pvam_692,
Ictidomys tridecemlineatus ENSSTOG00000027396 ortholog_one2one 2 retrogenes
retro_itri_1502, retro_itri_1552,
Vicugna pacos ENSVPAG00000012521 ortholog_one2one 2 retrogenes
retro_vpac_180, retro_vpac_215,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_777 76.64 76.26
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Download FASTA sequences of all ENSCPOG00000007310 retrocopies