Parental gene: | CTPS1, ENSCPOG00000003389 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_180:358968..394424(+) |
>ENSCPOG00000003389
ATGAAGTACATTCTAGTTACTGGCGGTGTTATATCAGGAATTGGAAAAGGAGTCATCGCCAGTAGTGTGGGCACCATACT
TAAGTCATGTGGCTTACATGTAACTTCAATTAAAGTTGATCCCTACATTAACATTGATGCAGGAACATTCTCACCTTATG
AGCATGGTGAAGTGTTTGTTCTGGATGACGGTGGGGAAGTTGACCTGGACCTGGGGAACTATGAGCGGTTCCTTGACATC
CGCCTCACCAAGGACAACAATCTGACTACTGGGAAGATCTACCAGCACGTCATTAACAAGGAACGCAAAGGAGACTACTT
GGGGAAAACTGTCCAAGTTGTCCCTCACATCACAGATGCAATCCAGGATTGGGTGATGAAACAGGCGTTAGTACCAGTAG
ATGAAGACGGCCTGGAACCGCAAGTGTGTGTTATCGAGCTCGGTGGAACAGTGGGAGATATTGAAAGCATGCCCTTCATT
GAGGCCTTCCGGCAGTTCCAGTTCAAGGTCAAAAAGGAGAACTTTTGTAATATCCATGTCAGTCTGGTTCCTCAGCCAAG
TTCAACGGGAGAACAGAAGACAAAACCCACCCAAAACAGTGTTCGGGAGCTTCGAGGGCTTGGGCTCTCCCCAGACCTGG
TTGTGTGCAGGTGCTCAAATCCTCTGGACACATCTGTGAAAGAAAAAATATCAATGTTCTGCCATGTGGAACCTGAACAA
GTGATCTGTGTCCATGATGTCTCCACTATCTATCGAGTCCCCTTGTTGTTAGAAGAGCAAGGGGTTGTAGATTATTTTCT
TCGAAGACTTGACCTTCCTGTTGAGAGGCAGCCACGAAAAATGCTGATGAAGTGGAAGGAGATGGCAGACAGATATGATC
GATTGCTAGAGACCTGCTCTATTGCTCTTGTGGGCAAATACACCAAGTTCTCAGACTCATATGCCTCAGTCATTAAAGCA
CTAGAGCATTCTGCATTGGCCATCAACCACAAGTTGGAAATTAAGTACATAGATTCCACGGACCTGGAACTGAGCACCAT
GCAGGAGGACCCCGTGCGCTACCACGAGGCCTGGCAGAAGCTCTGCAGTGCCCATGGGGTGCTGGTGCCAGGAGGGTTTG
GTGTTCGAGGAACTGAAGGAAAAATCCAGGCAATTTCCTGGGCTCGGAAACAGAGAAAACCTCTTTTGGGTGTGTGCTTA
GGGATGCAGCTGGCAGTGGTTGAATTTTCAAGAAACGTGTTGGGATGGCAAGATGCCAATTCTACAGAGTTTGACCCTAA
GACCAGTCATCCCGTGGTCATCGAAATGCCAGAACATAATCCTGGGCAGATGGGCGGAACCATGAGGCTGGGCAAGCGGA
GAACCCTGTTCCAGACCAAGAACTCCATCATGAGGAAACTCTATGGAGACTTAGACTACTTGGAAGAGAGGCACCGCCAT
AGATTTGAGGTGAATCCAGTCTTGAAAAAGTGCCTGGAGGAGCAAGGTCTGAAATTTGTCGGCCAAGATGTTGAAGGCGA
GAGGATGGAGATTGTGGAGTTGGAAGATCATCCTTTCTTTGTTGGGGTTCAGTACCACCCTGAGTTCCTGTCCAGGCCTA
TCAAGCCCTCCCCACCCTACCTGGGCCTCCTCCTGGCCTCAGTGGGGCAGCTTCCGCATTACCTCCAGAAAGGCTGCAGG
CTCTCGCCCAGGGACACCTACAGTGACAGAAGTGGGAGCAGCTCTCCTGACTCTGAAATCACTGAACTGAAGTTTCCATC
AGTAAATCACAAT
ATGAAGTACATTCTAGTTACTGGCGGTGTTATATCAGGAATTGGAAAAGGAGTCATCGCCAGTAGTGTGGGCACCATACT
TAAGTCATGTGGCTTACATGTAACTTCAATTAAAGTTGATCCCTACATTAACATTGATGCAGGAACATTCTCACCTTATG
AGCATGGTGAAGTGTTTGTTCTGGATGACGGTGGGGAAGTTGACCTGGACCTGGGGAACTATGAGCGGTTCCTTGACATC
CGCCTCACCAAGGACAACAATCTGACTACTGGGAAGATCTACCAGCACGTCATTAACAAGGAACGCAAAGGAGACTACTT
GGGGAAAACTGTCCAAGTTGTCCCTCACATCACAGATGCAATCCAGGATTGGGTGATGAAACAGGCGTTAGTACCAGTAG
ATGAAGACGGCCTGGAACCGCAAGTGTGTGTTATCGAGCTCGGTGGAACAGTGGGAGATATTGAAAGCATGCCCTTCATT
GAGGCCTTCCGGCAGTTCCAGTTCAAGGTCAAAAAGGAGAACTTTTGTAATATCCATGTCAGTCTGGTTCCTCAGCCAAG
TTCAACGGGAGAACAGAAGACAAAACCCACCCAAAACAGTGTTCGGGAGCTTCGAGGGCTTGGGCTCTCCCCAGACCTGG
TTGTGTGCAGGTGCTCAAATCCTCTGGACACATCTGTGAAAGAAAAAATATCAATGTTCTGCCATGTGGAACCTGAACAA
GTGATCTGTGTCCATGATGTCTCCACTATCTATCGAGTCCCCTTGTTGTTAGAAGAGCAAGGGGTTGTAGATTATTTTCT
TCGAAGACTTGACCTTCCTGTTGAGAGGCAGCCACGAAAAATGCTGATGAAGTGGAAGGAGATGGCAGACAGATATGATC
GATTGCTAGAGACCTGCTCTATTGCTCTTGTGGGCAAATACACCAAGTTCTCAGACTCATATGCCTCAGTCATTAAAGCA
CTAGAGCATTCTGCATTGGCCATCAACCACAAGTTGGAAATTAAGTACATAGATTCCACGGACCTGGAACTGAGCACCAT
GCAGGAGGACCCCGTGCGCTACCACGAGGCCTGGCAGAAGCTCTGCAGTGCCCATGGGGTGCTGGTGCCAGGAGGGTTTG
GTGTTCGAGGAACTGAAGGAAAAATCCAGGCAATTTCCTGGGCTCGGAAACAGAGAAAACCTCTTTTGGGTGTGTGCTTA
GGGATGCAGCTGGCAGTGGTTGAATTTTCAAGAAACGTGTTGGGATGGCAAGATGCCAATTCTACAGAGTTTGACCCTAA
GACCAGTCATCCCGTGGTCATCGAAATGCCAGAACATAATCCTGGGCAGATGGGCGGAACCATGAGGCTGGGCAAGCGGA
GAACCCTGTTCCAGACCAAGAACTCCATCATGAGGAAACTCTATGGAGACTTAGACTACTTGGAAGAGAGGCACCGCCAT
AGATTTGAGGTGAATCCAGTCTTGAAAAAGTGCCTGGAGGAGCAAGGTCTGAAATTTGTCGGCCAAGATGTTGAAGGCGA
GAGGATGGAGATTGTGGAGTTGGAAGATCATCCTTTCTTTGTTGGGGTTCAGTACCACCCTGAGTTCCTGTCCAGGCCTA
TCAAGCCCTCCCCACCCTACCTGGGCCTCCTCCTGGCCTCAGTGGGGCAGCTTCCGCATTACCTCCAGAAAGGCTGCAGG
CTCTCGCCCAGGGACACCTACAGTGACAGAAGTGGGAGCAGCTCTCCTGACTCTGAAATCACTGAACTGAAGTTTCCATC
AGTAAATCACAAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .26 RPM |
| SRP017611_kidney | 7 .75 RPM |
| SRP017611_brain | 13 .34 RPM |
| SRP040447_lung | 13 .67 RPM |
| SRP040447_skeletal_muscle | 18 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005540 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015398 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_271 | 74.22 | 70.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000003389 retrocopies