Parental gene:

MAP2K1, ENSCPOG00000003053

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_101:844845..901324(-)


>ENSCPOG00000003053
ATGCCCAAGAAGAAGCCGACGCCCATCCAGCTGAACCCGGCCCCCGACGGCTCGGCGGTGAACGGGACCAGCTCGGCCGA
GACCAACCTAGAGGCTTTGCAGAAGAAGCTGGAGGAGCTGGAGCTGGATGAGCAGCAGCGGAAGCGCCTCGAAGCTTTCC
TGACACAGAAGCAGAAGGTGGGCGAGCTGAAGGACGATGACTTTGAGAAGATCAGTGAGCTGGGTGCCGGCAATGGCGGT
GTGGTGTTCAAGGTCTCCCACAAGCCATCTGGCCTGGTCATGGCCCGAAAGCTTATCCACCTGGAGATCAAGCCAGCCAT
CCGCAATCAGATCATCCGTGAGCTGCAGGTTCTGCACGAGTGCAACTCGCCCTACATTGTGGGCTTCTATGGGGCCTTCT
ACAGTGATGGCGAGATCAGCATCTGCATGGAGCACATGGATGGAGGTTCCTTGGATCAAGTCCTGAAGAAAGCTGGAAGA
ATTCCTGAGCAAATTTTAGGAAAAGTTAGCATTGCTGTGATCAAAGGCCTGACATACCTGAGGGAGAAGCACAAGATTAT
GCACAGAGATGTCAAGCCCTCCAACATCCTGGTCAACTCCCGCGGGGAGATCAAGCTCTGTGACTTTGGGGTCAGCGGGC
AGCTCATCGATTCCATGGCCAACTCCTTCGTGGGCACCCGGTCCTACATGTCGCCAGAGAGACTGCAGGGCACACACTAC
TCAGTGCAGTCGGACATCTGGAGCATGGGACTGTCACTGGTGGAGATGGCGGTTGGGAGGTACCCCATCCCCCCTCCAGA
TGCCAAGGAGCTGGAGCTGGTGTTCGGGTGCCAGGTGGAAGGAGATGCAGCTGAGATGCCGCCCAGGCCCAGGACCCCCG
GAAGACCCCTGAGCTCATATGGAATGGACAGCCGGCCTCCCATGGCGATTTTCGAGCTGTTGGATTACATAGTCAACGAG
CCACCTCCCAAACTGCCCAGTGGAGTCTTCAGTCTGGAATTCCAGGACTTTGTAAATAAATGCTTAATAAAGAACCCTGC
GGAGAGAGCAGACTTGAAGCAGCTCATGGTTCATGCCTTCATCAAGCGCTCTGATGCTGAGGAGGTGGACTTCGCAGGTT
GGCTCTGTGCCACCATCGGCCTTAACCAGCCCAGTACCCCGACCCACGTGGCCAGCATC

Library Parental gene expression (RPM)
SRP017611_liver 18 .02 RPM
SRP017611_kidney 152 .22 RPM
SRP017611_brain 119 .40 RPM
SRP040447_lung 65 .55 RPM
SRP040447_skeletal_muscle 45 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000033983 ortholog_one2one 1 retrogene
retro_btau_1416,
Gorilla gorilla ENSGGOG00000003687 ortholog_one2one 1 retrogene
retro_ggor_2650,
Macaca mulatta ENSMMUG00000016840 ortholog_one2many 1 retrogene
retro_mmul_2285,
Otolemur garnettii ENSOGAG00000015876 ortholog_one2one 1 retrogene
retro_ogar_1598,
Ochotona princeps ENSOPRG00000007770 ortholog_one2one 1 retrogene
retro_opri_846,
Pongo abelii ENSPPYG00000006576 ortholog_one2one 2 retrogenes
retro_pabe_3092, retro_pabe_3249,
Pan troglodytes ENSPTRG00000007193 ortholog_one2one 1 retrogene
retro_ptro_2676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_483 60.85 65.14
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Download FASTA sequences of all ENSCPOG00000003053 retrocopies