Parental gene: | PDCD2, ENSCPOG00000002920 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_58:1271650..1273243(+) |
>ENSCPOG00000002920
GGTTTTTCAGGAGAAGCACCTGAAGAAGAGTTGGAGTCCATGGCCAGGCATGAATCTAGAGAAGATAACATATTCCAGAA
GTTTAAAACTCAGATAGCCCATGAACCAGAGCAGATTCTCAGATACGGCAGAGGTGTTGAGCCTATCTGGATTTCTGGTA
AAAATATTCCCCAAGACAAGGATATTCCAGACTGTCCCTGTGGTGCCAAGAGAATTTTTGAGTTCCAGGTCATGCCACAG
CTGCTCAACCACCTGAAAGCAGACAGACTGGGCACGAGTGTGGACTGGGGCATCCTGGCTGTCTTCACCTGTGCGGAGAG
CTGTAGTTTGGGCAGTGGCTACACAGAGGAATTCGTGTGGAAGCAGGATGTAACAGATACACCTTAA
GGTTTTTCAGGAGAAGCACCTGAAGAAGAGTTGGAGTCCATGGCCAGGCATGAATCTAGAGAAGATAACATATTCCAGAA
GTTTAAAACTCAGATAGCCCATGAACCAGAGCAGATTCTCAGATACGGCAGAGGTGTTGAGCCTATCTGGATTTCTGGTA
AAAATATTCCCCAAGACAAGGATATTCCAGACTGTCCCTGTGGTGCCAAGAGAATTTTTGAGTTCCAGGTCATGCCACAG
CTGCTCAACCACCTGAAAGCAGACAGACTGGGCACGAGTGTGGACTGGGGCATCCTGGCTGTCTTCACCTGTGCGGAGAG
CTGTAGTTTGGGCAGTGGCTACACAGAGGAATTCGTGTGGAAGCAGGATGTAACAGATACACCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .05 RPM |
| SRP017611_kidney | 5 .23 RPM |
| SRP017611_brain | 5 .81 RPM |
| SRP040447_lung | 9 .31 RPM |
| SRP040447_skeletal_muscle | 3 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020634 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019916 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017193 | possible_ortholog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000025312 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000022768 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_168 | 73.40 | 72.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000002920 retrocopies