Parental gene:

RPL10, ENSCPOG00000002355

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_148:1551896..1554694(-)


>ENSCPOG00000002355
ATGGGACGCCGTCCCGCCCGGTGTTACCGGTACTGTAAGAACAAGCCCTACCCAAAGTCTCGCTTCTGCCGAGGTGTCCC
TGATGCCAAGATCCGCATTTTTGACCTGGGGCGGAAGAAGGCGAAAGTGGATGAGTTCCCACTTTGTGGCCACATGGTGT
CTGATGAATATGAGCAGCTGTCCTCGGAAGCAGCTCTGGAGGCCGCCCGGATTTGTGCCAACAAGTACATGGTGAAGAGC
TGTGGCAAAGATGGCTTTCACATCCGTGTGCGGCTCCACCCTTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGTGC
TGGGGCTGACAGGCTCCAGACTGGCATGAGGGGTGCCTTTGGGAAGCCCCAGGGCACAGTGGCAAGGGTTCACATTGGAC
AGGTAATCATGTCTATCCGCACCAAGCTGCAGAACAAGGAGCATGTGATTGAGGCTCTGCGCAGGGCCAAGTTCAAGTTT
CCTGGGCGCCAGAAGATCCATATCTCTAAGAAGTGGGGCTTCACAAAGTTCAATGCAGATGAATTTGAAGACATGGTGGC
CGAGAAGCGCCTCATTCCTGATGGCTGTGGGGTGAAATACATCCCGAATCGTGGTCCCCTGGACAAGTGGCGGGCCTTGC
ATTCCTGA

Library Parental gene expression (RPM)
SRP017611_liver 255 .50 RPM
SRP017611_kidney 274 .70 RPM
SRP017611_brain 158 .98 RPM
SRP040447_lung 518 .89 RPM
SRP040447_skeletal_muscle 535 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007454 possible_ortholog 2 retrogenes
retro_btau_140, retro_btau_99,
Equus caballus ENSECAG00000017154 ortholog_one2one 1 retrogene
retro_ecab_113,
Macropus eugenii ENSMEUG00000013163 possible_ortholog 3 retrogenes
retro_meug_1839, retro_meug_5, retro_meug_547,
Microcebus murinus ENSMICG00000004658 ortholog_one2one 2 retrogenes
retro_mmur_1077, retro_mmur_4,
Monodelphis domestica ENSMODG00000008731 possible_ortholog 2 retrogenes
retro_mdom_177, retro_mdom_829,
Mustela putorius furo ENSMPUG00000009320 ortholog_one2one 3 retrogenes
retro_mputfur_1405, retro_mputfur_54, retro_mputfur_84,
Mus musculus ENSMUSG00000008682 possible_ortholog 1 retrogene
retro_mmus_71,
Otolemur garnettii ENSOGAG00000000099 ortholog_one2one 3 retrogenes
retro_ogar_293, retro_ogar_2995, retro_ogar_3284,
Ictidomys tridecemlineatus ENSSTOG00000011857 ortholog_one2one 2 retrogenes
retro_itri_174, retro_itri_506,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_64 92.09 100.00
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Download FASTA sequences of all ENSCPOG00000002355 retrocopies