Parental gene: | AHSA2, ENSCJAG00000034768 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 14:46047748..46057177(-) |
>ENSCJAG00000034768
ATGGCCAAGTGGGGCCAAGGGGACCCGCGCTGGATCGTGGAGGAGCGGGAGGATGGGACCAACGTGAACAACTGGCACTG
GACAGAGCGGAATGCTACCAGCTGGTCCAAAGGGAAGCTCCAGGAGCTCCTGGTGGGTATCGTCGTGGAGAATGAGACTG
GGCGTGGTGAGATCAGCGAGCGGAAGCAGGTGGAAGGTGAGGCTTCCTGCAGCAGCCGCAAGGGAAAGCTGATTTTCCTC
TATGAGTGGAACATCAAACTGGACTGGAAAGGTATCCTAAAAGAATCTGGTGTGAAGCACAAGGGTTTGATTGAAATACC
CAATCTTTCTGAAGAAAACGAAGATGACACTGAGGTGAACGTGAGTAAAAAGAAAGGAGATGGGGATATACTGAAGGATC
TTATGAAAACTGCAGGCACCGCCAAGGTCAGGGAGGCCCTTGGAGATTACCTGAAGGCACTTAAGATGGAATTTACAGTG
GGAATGATTTTACCAACGAAATCTATGGCAACTCAGGAATTGACTGGTAAAAGAAAACTGATAAAGACCAGGACTGGCAG
TGCTAAAAAGGTTCAGGCCTCATCTCCAGTGGTACTGGGTGTAAGGATTCCCTCTGTGGCTCTTCGCATGATGGAACTGT
TTGACACAACTGTAGTGCTGTATAGCATATTCACTGTGAAGGATTTGGTGCAAAAGTTTTCTAAATCTACTGCTGTATTG
GAAGCTGAAAAGGGAGGGAAATTCCAAATGTTTGATGGGAACATCACTGGTGAGTATCTAGAATTGTTAGCCAATAAAAA
GATCGTCATGAAATGGAGATGCAGGAACTGGCCAGAAGGAACACATGCCACGGTTGCACTGAATTTTGTGCCTACTCTCG
GGCAAACAGAATTACAATTGGACTGTAAAGGAGTTCCTGTCTGTAAAGAAGAGAACATGAAATTCTGTTGGCAGAAGCAG
CATTTTGAAGAAATAAAAGAAAAAGTGTCATTTACCTCTCCCTATTTT
ATGGCCAAGTGGGGCCAAGGGGACCCGCGCTGGATCGTGGAGGAGCGGGAGGATGGGACCAACGTGAACAACTGGCACTG
GACAGAGCGGAATGCTACCAGCTGGTCCAAAGGGAAGCTCCAGGAGCTCCTGGTGGGTATCGTCGTGGAGAATGAGACTG
GGCGTGGTGAGATCAGCGAGCGGAAGCAGGTGGAAGGTGAGGCTTCCTGCAGCAGCCGCAAGGGAAAGCTGATTTTCCTC
TATGAGTGGAACATCAAACTGGACTGGAAAGGTATCCTAAAAGAATCTGGTGTGAAGCACAAGGGTTTGATTGAAATACC
CAATCTTTCTGAAGAAAACGAAGATGACACTGAGGTGAACGTGAGTAAAAAGAAAGGAGATGGGGATATACTGAAGGATC
TTATGAAAACTGCAGGCACCGCCAAGGTCAGGGAGGCCCTTGGAGATTACCTGAAGGCACTTAAGATGGAATTTACAGTG
GGAATGATTTTACCAACGAAATCTATGGCAACTCAGGAATTGACTGGTAAAAGAAAACTGATAAAGACCAGGACTGGCAG
TGCTAAAAAGGTTCAGGCCTCATCTCCAGTGGTACTGGGTGTAAGGATTCCCTCTGTGGCTCTTCGCATGATGGAACTGT
TTGACACAACTGTAGTGCTGTATAGCATATTCACTGTGAAGGATTTGGTGCAAAAGTTTTCTAAATCTACTGCTGTATTG
GAAGCTGAAAAGGGAGGGAAATTCCAAATGTTTGATGGGAACATCACTGGTGAGTATCTAGAATTGTTAGCCAATAAAAA
GATCGTCATGAAATGGAGATGCAGGAACTGGCCAGAAGGAACACATGCCACGGTTGCACTGAATTTTGTGCCTACTCTCG
GGCAAACAGAATTACAATTGGACTGTAAAGGAGTTCCTGTCTGTAAAGAAGAGAACATGAAATTCTGTTGGCAGAAGCAG
CATTTTGAAGAAATAAAAGAAAAAGTGTCATTTACCTCTCCCTATTTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 8 .99 RPM |
| SRP051959_skeletal_muscle | 1 .75 RPM |
| SRP051959_lymph_node | 13 .47 RPM |
| SRP051959_lung | 11 .00 RPM |
| SRP051959_liver | 3 .01 RPM |
| SRP051959_kidney | 3 .00 RPM |
| SRP051959_heart | 5 .24 RPM |
| SRP051959_colon | 4 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000005107 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014565 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012385 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000023268 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000013366 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2904 | 74.89 | 69.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000034768 retrocopies