Parental gene: | HEBP1, ENSCJAG00000021628 |
| Aliases: | None |
| Description: | heme binding protein 1 [Source:HGNC Symbol;Acc:17176] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:8528289..8554737(+) |
>ENSCJAG00000021628
ATGTTGGGCATGATCAGGAACTCGCTGTTCGGAAGCGTAGAGACGTGGCCTTGGCAGGTCCTAAGCAAAGGGGACAAGGA
AGAAGTCTCCTATGAAGAAAGGGCCTGTGAAGGAGGCAAGTTTGCCACAGTAGAAGTGACAGATAAGCCTGTGGATGAGG
CTCTACGGGAAGCAATGCCCAAGGTTGCAAAGTACGCGGGGGGCACCAATGACAAGGGAATTGGGATGGGGATGACGGTC
CCTATTTCCTTTGCCGTGTTCCCCAATGAAGATGGCTCTCTGCAGAAGAAATTGAAAGTCTGGTTCCGGATTCCAAACCA
GTTTCAAAGCGACCCACCAGCTCCCAGTGACAAAAGCGTTAAGATTGAGGAACGGGAAGGCATCACCGTCTATTCCATGC
AGTTTGGTGGCTATGCCAAGGAAGCAGACTATGTAGCGCATGCCTCCCGGCTGCGTGCTGCCCTGGAGGGCACAGCCACC
TGCAGGGGGGATGTCTACTTCTGTACCGGCTATGACCCTCCCATGAAGCCCTACGGACGGCGCAACGAGATCTGGCTGTT
GAAGACATGA
ATGTTGGGCATGATCAGGAACTCGCTGTTCGGAAGCGTAGAGACGTGGCCTTGGCAGGTCCTAAGCAAAGGGGACAAGGA
AGAAGTCTCCTATGAAGAAAGGGCCTGTGAAGGAGGCAAGTTTGCCACAGTAGAAGTGACAGATAAGCCTGTGGATGAGG
CTCTACGGGAAGCAATGCCCAAGGTTGCAAAGTACGCGGGGGGCACCAATGACAAGGGAATTGGGATGGGGATGACGGTC
CCTATTTCCTTTGCCGTGTTCCCCAATGAAGATGGCTCTCTGCAGAAGAAATTGAAAGTCTGGTTCCGGATTCCAAACCA
GTTTCAAAGCGACCCACCAGCTCCCAGTGACAAAAGCGTTAAGATTGAGGAACGGGAAGGCATCACCGTCTATTCCATGC
AGTTTGGTGGCTATGCCAAGGAAGCAGACTATGTAGCGCATGCCTCCCGGCTGCGTGCTGCCCTGGAGGGCACAGCCACC
TGCAGGGGGGATGTCTACTTCTGTACCGGCTATGACCCTCCCATGAAGCCCTACGGACGGCGCAACGAGATCTGGCTGTT
GAAGACATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 17 .35 RPM |
| SRP051959_skeletal_muscle | 1 .57 RPM |
| SRP051959_lymph_node | 4 .25 RPM |
| SRP051959_lung | 6 .23 RPM |
| SRP051959_liver | 30 .87 RPM |
| SRP051959_kidney | 13 .87 RPM |
| SRP051959_heart | 4 .68 RPM |
| SRP051959_colon | 3 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010728 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000013209 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000019060 | within_species_paralog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000011702 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000033976 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000014555 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2023 | 68.42 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000021628 retrocopies