Parental gene:

LY6E, ENSCJAG00000021460

Aliases:None
Description:lymphocyte antigen 6 complex, locus E [Source:HGNC Symbol;Acc:6727]
Organism:Marmoset (Callithrix jacchus)
Coordinates:16:51609444..51610359(-)


>ENSCJAG00000021460
ATGAAGACCTTGCTGGTGCTGCTGGCTGCCCTTCTGGGTGTTGAGCGAGCCGGCTCGCTGATGTGCTTCTCCTGCCAGAA
CCAGAAGAGCAATCTGTACTGCCTGAAGCCCACCATCTGCTCCGACCAGGACAGCTACTGCCTGACGGTGACTGCGTCTG
CCGGCATCGGAAAGATCGTCACATTTGGCCACACCCTGAGCAAGTCCTGTTCCCCGGTCTGTCCCCTCCCAGGAAACGTC
AATGCTGGCATAGCTTCCATGGGCATCCGCTGCTGCCAGGGCTTCCTGTGCAATTTCAGCGCGGCCAACGGCGGGCTGCG
GGCCAGCGCCACCCTGCTGGGTGCCGGACTGCTGCTGAGCCTGTTGCCTGCCCTGCTGCGTTTTGGCCCCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 26 .58 RPM
SRP051959_skeletal_muscle 1 .46 RPM
SRP051959_lymph_node 7 .03 RPM
SRP051959_lung 10 .80 RPM
SRP051959_liver 5 .59 RPM
SRP051959_kidney 2 .17 RPM
SRP051959_heart 3 .17 RPM
SRP051959_colon 2 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Mus musculus ENSMUSG00000022587 ortholog_one2one 1 retrogene
retro_mmus_724,
Pongo abelii ENSPPYG00000018927 ortholog_one2one 1 retrogene
retro_pabe_2122,
Tursiops truncatus ENSTTRG00000001986 ortholog_one2one 2 retrogenes
retro_ttru_1323, retro_ttru_742,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_808 80.95 63.85
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2. retro_cjac_2250 98.46 100.00
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Download FASTA sequences of all ENSCJAG00000021460 retrocopies