Parental gene:

ENSCJAG00000021032

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:9:38502533..38512418(-)


>ENSCJAG00000021032
ATGAACATATTTGATCGAAAGATCAACTTTGATGCGCTTTTAAAATTTTCTCATATAACCCCCTCAACACAGCAGCACCT
GAAGAAGGTCTACGCAAGTTTTGCCCTTTGTATGTTTGTGGCGGCTGCGGGGGCCTATGTCCATGTGATCACTCATTTCA
TTCAGGCTGGCCTGCTGTCTGCTTTGGGCTCCCTGATATTGATGATTTGGCTGATGGCAACACCTCACAGCCATGAAACT
GAGCAAAAAAGACTGGGACTTCTTGCTGGATTTGCTTTCCTTACAGGAGTTGGCCTGGGCCCTGCCCTGGAGTTTTGCAT
TGCCATCAACCCCAGTATCCTTCCCACCGCTTTCATGGGCACAGCAATGATCTTCACCTGCTTTACCCTGAGTGCACTCT
ATGCCAAGCGTCGTAGCTACCTCTTTCTGGGAGGTATCTTGATGTCAGCCCTGAGCCTATTGCTTTTGTCTTCCCTGGGG
AATGTTTTCTTTGGATCCATTTGGCTTTTCCAAGCAAACCTATATGTGGGACTGGTGGTCATGTGTGGCTTTGTCCTTTT
TGATACTCAACTCATTATTGAAAAGGCTGAAAATGGAGATCAAGATTATATCTGGCACTGCATTGATCTCTTCTTAGATT
TCATTACTCTCTTCAGAAAACTCATGATGATCCTGGCCCTGAACGAAAAGGATAAGAAGAAAGAGAAGAAATGA

Library Parental gene expression (RPM)
SRP051959_spleen 92 .00 RPM
SRP051959_skeletal_muscle 61 .98 RPM
SRP051959_lymph_node 71 .46 RPM
SRP051959_lung 103 .31 RPM
SRP051959_liver 432 .02 RPM
SRP051959_kidney 328 .24 RPM
SRP051959_heart 46 .69 RPM
SRP051959_colon 123 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018588 ortholog_one2many 1 retrogene
retro_btau_762,
Canis familiaris ENSCAFG00000008400 ortholog_one2many 2 retrogenes
retro_cfam_1220, retro_cfam_876,
Dasypus novemcinctus ENSDNOG00000007882 ortholog_one2many 2 retrogenes
retro_dnov_164, retro_dnov_857,
Macropus eugenii ENSMEUG00000015590 ortholog_many2many 4 retrogenes
retro_meug_1076, retro_meug_1706, retro_meug_2157, retro_meug_48,
Monodelphis domestica ENSMODG00000004277 ortholog_many2many 2 retrogenes
retro_mdom_210, retro_mdom_250,
Otolemur garnettii ENSOGAG00000005137 ortholog_one2many 2 retrogenes
retro_ogar_1074, retro_ogar_3470,
Pteropus vampyrus ENSPVAG00000016821 ortholog_one2many 1 retrogene
retro_pvam_755,
Sarcophilus harrisii ENSSHAG00000010366 ortholog_many2many 1 retrogene
retro_shar_622,
Ictidomys tridecemlineatus ENSSTOG00000001165 ortholog_one2many 2 retrogenes
retro_itri_1273, retro_itri_564,
Tarsius syrichta ENSTSYG00000002427 ortholog_one2many 1 retrogene
retro_tsyr_916,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_272 97.89 100.00
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Download FASTA sequences of all ENSCJAG00000021032 retrocopies