Parental gene: | PRKAG1, ENSCJAG00000020827 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:37774435..37793608(-) |
>ENSCJAG00000020827
ATGGAGACGGTCATTTCTTCAGATAGCTCCCCAGCTGTGGAAAATGAGCATCCTCAAGAGACCCCAGAATCCAACAATAG
CGTGTATACTTCCTTCATGAAGTCTCATCGCTGCTATGACCTGATTCCCACAAGCTCCAAATTGGTTGTATTTGATACAT
CCCTGCAGGTGAAGAAAGCTTTCTTTGCTTTGGTGACTAACGGTGTACGAGCTGCCCCTTTATGGGATAGTAAGAAGCAA
AGTTTTGTGGTGCTTAGGGCTCTGTCTTGTCCTCTAGGTATGCTGACCATCACTGATTTCATCAATATTCTGCACCGCTA
CTATAAATCAGCCTTGGTACAGATCTATGAGCTAGAAGAACACAAGATAGAAACTTGGAGAGAGGTGTACCTCCAGGACT
CCTTTAAACCGCTTGTCTGCATTTCTCCTAATGCCAGCTTGTTTGATGCTGTCTCTTCATTAATTCGGAACAAGATCCAC
AGGCTGCCAGTTATTGACCCAGAATCGGGCAATACTTTGTACATCCTCACCCACAAGCGCATTCTGAAGTTCCTCAAATT
GTTTATCACTGAATTTCCCAAGCCAGAGTTCATGTCCAAGTCTCTGGAAGAGCTACAGATTGGCACCTATGCCAATATTG
CTATGGTTCGCACTACTACCCCCGTCTATGTGGCTCTGGGCATTTTTGTACAGCATCGAGTCTCAGCTCTGCCAGTGGTG
GATGAGAAGGGGCGTGTGGTGGACATCTACTCCAAGTTTGATGTGATCAATCTGGCAGCAGAAAAGACCTACAACAACCT
AGATGTGTCTGTGACTAAAGCCCTGCAACACCGATCACACTACTTTGAGGGTGTTCTCAAGTGCTACCTGCATGAGACTC
TGGAGACCATCATCAACAGGCTAGTGGAAGCAGAGGTTCACCGACTTGTAGTGGTGGATGAAAATGATGTGGTCAAGGGA
ATTGTATCACTGTCTGACATCCTGCAGGCCCTGGTGCTTACAGGTGGAGAGAAGAATCCCTGA
ATGGAGACGGTCATTTCTTCAGATAGCTCCCCAGCTGTGGAAAATGAGCATCCTCAAGAGACCCCAGAATCCAACAATAG
CGTGTATACTTCCTTCATGAAGTCTCATCGCTGCTATGACCTGATTCCCACAAGCTCCAAATTGGTTGTATTTGATACAT
CCCTGCAGGTGAAGAAAGCTTTCTTTGCTTTGGTGACTAACGGTGTACGAGCTGCCCCTTTATGGGATAGTAAGAAGCAA
AGTTTTGTGGTGCTTAGGGCTCTGTCTTGTCCTCTAGGTATGCTGACCATCACTGATTTCATCAATATTCTGCACCGCTA
CTATAAATCAGCCTTGGTACAGATCTATGAGCTAGAAGAACACAAGATAGAAACTTGGAGAGAGGTGTACCTCCAGGACT
CCTTTAAACCGCTTGTCTGCATTTCTCCTAATGCCAGCTTGTTTGATGCTGTCTCTTCATTAATTCGGAACAAGATCCAC
AGGCTGCCAGTTATTGACCCAGAATCGGGCAATACTTTGTACATCCTCACCCACAAGCGCATTCTGAAGTTCCTCAAATT
GTTTATCACTGAATTTCCCAAGCCAGAGTTCATGTCCAAGTCTCTGGAAGAGCTACAGATTGGCACCTATGCCAATATTG
CTATGGTTCGCACTACTACCCCCGTCTATGTGGCTCTGGGCATTTTTGTACAGCATCGAGTCTCAGCTCTGCCAGTGGTG
GATGAGAAGGGGCGTGTGGTGGACATCTACTCCAAGTTTGATGTGATCAATCTGGCAGCAGAAAAGACCTACAACAACCT
AGATGTGTCTGTGACTAAAGCCCTGCAACACCGATCACACTACTTTGAGGGTGTTCTCAAGTGCTACCTGCATGAGACTC
TGGAGACCATCATCAACAGGCTAGTGGAAGCAGAGGTTCACCGACTTGTAGTGGTGGATGAAAATGATGTGGTCAAGGGA
ATTGTATCACTGTCTGACATCCTGCAGGCCCTGGTGCTTACAGGTGGAGAGAAGAATCCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 8 .97 RPM |
| SRP051959_skeletal_muscle | 9 .32 RPM |
| SRP051959_lymph_node | 7 .17 RPM |
| SRP051959_lung | 8 .02 RPM |
| SRP051959_liver | 11 .65 RPM |
| SRP051959_kidney | 12 .62 RPM |
| SRP051959_heart | 16 .80 RPM |
| SRP051959_colon | 11 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006964 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000006397 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000000091 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011156 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008409 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000000185 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004730 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3045 | 96.00 | 73.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3892 | 95.98 | 73.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020827 retrocopies