Parental gene:

SYF2, ENSCJAG00000018559

Aliases:None
Description:SYF2 homolog, RNA splicing factor (S. cerevisiae) [Source:HGNC Symbol;Acc:19824]
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:59296420..59300793(-)


>ENSCJAG00000018559
ATGGCGGCTGTTGCTGCATCCGAGGTGCTGGTGGACAGCGTGGAGGAGGGGTCCTTTGCTGCGGCGGCGGAGTTGGCCGC
TCAGAAGCGCGAACAGAGACTGCGCAAATTCCGGGAGCTGCACCTGAAGCGGAATGAAGCTCGTAAATTAAATCACCAAG
AAGTTGTGGAAGAAGATAAAAGACTAAAATTACCTGCAAATTGGGAAGCCAAAAAAGCTCGTTTGGAGTGGGAACTGCAA
GAAGAAGAAAAGAAAAAGGAATGTGCAGCAAGAGGAGAAGATTATGAGAAAGTGAAGTTGCTGGAGATCAGTGCAGAAGA
TGCGGAAAGATGGGAGAGGAAAAAGAAGAGGAAAAACCCTGATCTGGGATTTTCAGATTATGCTGCTGCCCAGTTACGCC
AGTACCATCGGTTGACCAAGCAGATCAAACCTGACATGGAAACATATGAGAGACTGAGAGAAAAACAGTAA

Library Parental gene expression (RPM)
SRP051959_spleen 7 .29 RPM
SRP051959_skeletal_muscle 7 .40 RPM
SRP051959_lymph_node 6 .94 RPM
SRP051959_lung 7 .84 RPM
SRP051959_liver 4 .14 RPM
SRP051959_kidney 7 .94 RPM
SRP051959_heart 6 .47 RPM
SRP051959_colon 4 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010115 possible_ortholog 1 retrogene
retro_amel_566,
Bos taurus ENSBTAG00000001651 ortholog_one2one 1 retrogene
retro_btau_478,
Choloepus hoffmanni ENSCHOG00000005273 ortholog_one2one 1 retrogene
retro_chof_2034,
Homo sapiens ENSG00000117614 ortholog_one2one 1 retrogene
retro_hsap_4152,
Monodelphis domestica ENSMODG00000013951 ortholog_one2one 1 retrogene
retro_mdom_899,
Oryctolagus cuniculus ENSOCUG00000013050 ortholog_one2one 1 retrogene
retro_ocun_1522,
Sarcophilus harrisii ENSSHAG00000007152 ortholog_one2many 1 retrogene
retro_shar_15,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_467 52.38 53.85
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Download FASTA sequences of all ENSCJAG00000018559 retrocopies