Parental gene: | OBFC1, ENSCJAG00000018342 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:91333125..91382541(-) |
>ENSCJAG00000018342
ATGCAGCCTGAATCCTGCCGGTGTGAAGAGGAGACCCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTTGC
AAAACTCTACATCAGGGATATCCTGGACTTGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTACAATGGACATCCAA
TAAAACAGGTAGATGTCTTGGGAACTGTCATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGACAGC
ACTGGAGTTATAAACTGCATCTGCTGGAAAAAATTGAATACTGAGTCTGCATCAGCTGCTCCAAGTGTAGCAAGAGAGCT
CAGCTTAACCTCACAACTTAAGAAGCTACAAGAAACCATTGAGCAGAGAACAAAGATAGAGATTGGGGACATGATCCGAG
TCAGAGGCAGTATCCGCATGTACAGAGAAGAGCGAGAGATTCATGCCACCGCTTACTATAAAGTGGATGACCCAGTGTGG
AACATTCAAATCGCAAGGATGCTTGAGCTGCCCACTATCTACAGGAAAGTTTATGACCAGCCTTTTCACAGCTCAGCCCT
ACGGAAAGAAGAGGCACTAAGCAATCCAGGCACCTTGGACCTCCCCAGTCTCACGAGTTTGCTGAGTGAAAAAGCCAAAG
AATTCCTTATGGAGAACAGAGTGCAGAGCTTTTACCAGCAGGAGCTGGAAATGGTGGAGTCTTTGCTGGCCCTTGCCAAG
CAGCCTGTGATTCACAATGCCTGCTCCGACCAAGTGAATTTTACGAAGGACACCACTTCCAAGGCAATTCATAATATATT
TAAGAATGCTATACAGCTGTTGCAGGAAAAAGGACTTGTTTTCCAGAAAGATGATGGCTTCGATAACCTATACTATGTAA
CCAGAGAAGACAAAGACCTGCACAAAAAGATCCACCGGATTATTCAAGAGGACTGCCAGAAACCAAATCATGTGGAGAAG
GGCTGTCACTTCCTGCACATCTTGGCCTGTGCTCGCCTGAGCATCCGCCCAGGCCTGAGTGAGGCTGTGCTGCAGCAAGT
TCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCACAATGGAGCAATACTACACGGCATTCTGA
ATGCAGCCTGAATCCTGCCGGTGTGAAGAGGAGACCCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTTGC
AAAACTCTACATCAGGGATATCCTGGACTTGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTACAATGGACATCCAA
TAAAACAGGTAGATGTCTTGGGAACTGTCATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGACAGC
ACTGGAGTTATAAACTGCATCTGCTGGAAAAAATTGAATACTGAGTCTGCATCAGCTGCTCCAAGTGTAGCAAGAGAGCT
CAGCTTAACCTCACAACTTAAGAAGCTACAAGAAACCATTGAGCAGAGAACAAAGATAGAGATTGGGGACATGATCCGAG
TCAGAGGCAGTATCCGCATGTACAGAGAAGAGCGAGAGATTCATGCCACCGCTTACTATAAAGTGGATGACCCAGTGTGG
AACATTCAAATCGCAAGGATGCTTGAGCTGCCCACTATCTACAGGAAAGTTTATGACCAGCCTTTTCACAGCTCAGCCCT
ACGGAAAGAAGAGGCACTAAGCAATCCAGGCACCTTGGACCTCCCCAGTCTCACGAGTTTGCTGAGTGAAAAAGCCAAAG
AATTCCTTATGGAGAACAGAGTGCAGAGCTTTTACCAGCAGGAGCTGGAAATGGTGGAGTCTTTGCTGGCCCTTGCCAAG
CAGCCTGTGATTCACAATGCCTGCTCCGACCAAGTGAATTTTACGAAGGACACCACTTCCAAGGCAATTCATAATATATT
TAAGAATGCTATACAGCTGTTGCAGGAAAAAGGACTTGTTTTCCAGAAAGATGATGGCTTCGATAACCTATACTATGTAA
CCAGAGAAGACAAAGACCTGCACAAAAAGATCCACCGGATTATTCAAGAGGACTGCCAGAAACCAAATCATGTGGAGAAG
GGCTGTCACTTCCTGCACATCTTGGCCTGTGCTCGCCTGAGCATCCGCCCAGGCCTGAGTGAGGCTGTGCTGCAGCAAGT
TCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCACAATGGAGCAATACTACACGGCATTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 16 .83 RPM |
| SRP051959_skeletal_muscle | 12 .05 RPM |
| SRP051959_lymph_node | 17 .81 RPM |
| SRP051959_lung | 18 .69 RPM |
| SRP051959_liver | 11 .78 RPM |
| SRP051959_kidney | 18 .70 RPM |
| SRP051959_heart | 47 .43 RPM |
| SRP051959_colon | 11 .05 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000107960 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008979 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015323 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015282 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002628 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002919 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1791 | 63.82 | 78.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018342 retrocopies