Parental gene: | NDUFB1, ENSCJAG00000018067 |
| Aliases: | None |
| Description: | NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa [Source:HGNC Symbol;Acc:7695] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:117707531..117717777(-) |
>ENSCJAG00000018067
GTGATTTGCCGGCGCCACCCCTCTGCTCCCTGCGGACGCTGCGAATGGCAAGTCCCGAGGTCGCAACTTCTACGGAGGCG
GGTGGCTGAGTTCTCCGTTGTCCTTGGGGTCCCGGTCGCTGTTGCCACTGGGCCTGCAGCGATCATGGTAAACTTCCTTC
AACTTTTGCGGGACCAGTGGGTTGTTCTTTTTGTCCCTATGGGATTTGTCCTTGGCTGTTACCTTGACAGAAAGAATGAT
GAAAAGCTGACTGCCTTCCGGAATAAGAGTATGTTATATAAAAGGGAATTGCGACCCAATGAAGAATATACCTGGAAGTA
A
GTGATTTGCCGGCGCCACCCCTCTGCTCCCTGCGGACGCTGCGAATGGCAAGTCCCGAGGTCGCAACTTCTACGGAGGCG
GGTGGCTGAGTTCTCCGTTGTCCTTGGGGTCCCGGTCGCTGTTGCCACTGGGCCTGCAGCGATCATGGTAAACTTCCTTC
AACTTTTGCGGGACCAGTGGGTTGTTCTTTTTGTCCCTATGGGATTTGTCCTTGGCTGTTACCTTGACAGAAAGAATGAT
GAAAAGCTGACTGCCTTCCGGAATAAGAGTATGTTATATAAAAGGGAATTGCGACCCAATGAAGAATATACCTGGAAGTA
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 11 .01 RPM |
| SRP051959_skeletal_muscle | 33 .59 RPM |
| SRP051959_lymph_node | 9 .29 RPM |
| SRP051959_lung | 7 .58 RPM |
| SRP051959_liver | 16 .57 RPM |
| SRP051959_kidney | 19 .21 RPM |
| SRP051959_heart | 23 .71 RPM |
| SRP051959_colon | 9 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000014837 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000183648 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000022428 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017129 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000012731 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000006076 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006649 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000015319 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008130 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000003502 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1027 | 65.43 | 74.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1053 | 71.43 | 71.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_1330 | 78.08 | 67.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_2586 | 98.72 | 72.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_3294 | 70.00 | 75.47 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018067 retrocopies