Parental gene:

EFCAB2, ENSCJAG00000016907

Aliases:None
Description:EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:28166]
Organism:Marmoset (Callithrix jacchus)
Coordinates:19:35773317..35895085(-)


>ENSCJAG00000016907
ATGGCGGACGAGACGGACAGGGAAGAGACAGTAGTAGCAGAATTTCACAAAAAAATCAAAGGGGCCTTTGAAGTGTTTGA
CCATGAGTCGAATAATACAGTGGATGTGAGAGAGATTGGAACAATTATCAGGTCATTGGGATGCTGCCCTAGTGAAGGAG
AGCTGCATGATCTGATTGCAGAGATAGAGGAAGAAGAACCCACTGGATACATTCGATTTGAAAAATTTCTTCCGGTGATG
ACAGAAATACTACTAGAAAGAAGATACAGACCCATTCCAGAAGATGTCCTTCTTCGAGCCTTTGAGGTTTTAGATACAGC
TAACCGTGGATTTCTTACTAAGGACGAATTGATCAAGTACATGACTGAAGAAGGTTCTGTCTCCTCTGCTCACTCCCCAC
TGCTGGAGGTCCATAGAAAGTGGGGTGACACACTCTCCCCCCGTCCTTGTCACACTGTGGCCTCCCCCAGCGCGTCAGTG
CCTGCAGCATCCAGGCTCTGGAAAGATGATGTGCCCTTTCTACTTTGGAAAACCAGAATTCTCAGAAGACCAACAGAAAT
GCATGTAGAAAATGATGACAATGACTGGGTGTCAGAGGACACAGTGACCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 4 .18 RPM
SRP051959_skeletal_muscle 5 .92 RPM
SRP051959_lymph_node 3 .54 RPM
SRP051959_lung 4 .93 RPM
SRP051959_liver 4 .29 RPM
SRP051959_kidney 5 .70 RPM
SRP051959_heart 4 .53 RPM
SRP051959_colon 2 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000029154 ortholog_one2one 1 retrogene
retro_cfam_781,
Callithrix jacchus ENSCJAG00000016338 within_species_paralog 3 retrogenes
retro_cjac_106, retro_cjac_185, retro_cjac_316,
Equus caballus ENSECAG00000022403 ortholog_one2one 1 retrogene
retro_ecab_874,
Oryctolagus cuniculus ENSOCUG00000029593 ortholog_one2one 1 retrogene
retro_ocun_612,
Tarsius syrichta ENSTSYG00000006254 ortholog_one2one 2 retrogenes
retro_tsyr_1584, retro_tsyr_317,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3944 98.41 77.78
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000016907 retrocopies