Parental gene: | ARG2, ENSCJAG00000015277 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:92831496..92864900(+) |
>ENSCJAG00000015277
ATGTCCCTAAGGGGCAGTCTCTCGCGTCTCCTCCAGACGCGAGTGCATTCCATCCTGAAGAAATCCGTCCACTCCGTGGC
TGTCATAGGAGCCCCGTTCTCACAAGGGCAGAAAAGAAAAGGAGTGGAGCATGGTCCCGCTGCCATAAGAGAAGCTGGCC
TGATGAAAAGGCTCTCCAGTTTGGGCTGCCACCTAAAAGACTTTGGAGATTTGAGTTTTACTCCAGTTCCCAAAGATGAT
CTCTACAACAACCTAATAGTGAATCCACGCTCAGTGGGTCTTGCCAACCAGGAACTGGCTGAGGTGGTTAGTAGAGCTGT
GTCAGATGGCTACAGCTGTGTCACATTGGGAGGAGACCACAGCCTGGCAATCGGTACCATTAGTGGTCATGCCCGACACT
GCCCAGACCTTTGTGTTATCTGGGTTGATGCCCATGCTGACATCAACACACCCCTTACCACTTCATCAGGAAATCTCCAT
GGACAGCCAGTTTCATTTCTCCTCAGAGAACTACAGGACAAGGTACCACAACTCCCAGGATTTTCTTGGATCAAACCTTG
TATCTCTTCCCCAAGTATTGTGTATATTGGTCTAAGAGACGTAGATCCTCCCGAACATTTTATTTTAAAGAACTATGATA
TCCAGTATTTTTCCATGAGAGATATTGATCGACTTGGTATCCAGAAGGTCATGGAACAAACATTTGATCTGCTGATTGGC
AAGAGACAAAGACCAATCCATCTGAGTTTTGATATTGATGCATTTGACCCTACACTGGCTCCAGCCACAGGAACTCCTGT
GGTAGGAGGACTAACCTATCGAGAAGGGATGTATATTGCTGAGGAAATACACAATACAGGGTTGTTGTCGGCACTGGATC
TTGTAGAAGTCAATCCTCAGTTGGCCACCTCAGAGGAAGAGGCAAAGACTACAGCTAACCTGGCAGTGGATGTGATTGCT
TCAAGTTTTGGTCAGACAAGGGAAGGAGGGCACATTGTCTATGACCAACTTCCTACTCCCAGTTCACCAGATGAATCGGA
AAATCAAGCACGTGTGAGAATTTAG
ATGTCCCTAAGGGGCAGTCTCTCGCGTCTCCTCCAGACGCGAGTGCATTCCATCCTGAAGAAATCCGTCCACTCCGTGGC
TGTCATAGGAGCCCCGTTCTCACAAGGGCAGAAAAGAAAAGGAGTGGAGCATGGTCCCGCTGCCATAAGAGAAGCTGGCC
TGATGAAAAGGCTCTCCAGTTTGGGCTGCCACCTAAAAGACTTTGGAGATTTGAGTTTTACTCCAGTTCCCAAAGATGAT
CTCTACAACAACCTAATAGTGAATCCACGCTCAGTGGGTCTTGCCAACCAGGAACTGGCTGAGGTGGTTAGTAGAGCTGT
GTCAGATGGCTACAGCTGTGTCACATTGGGAGGAGACCACAGCCTGGCAATCGGTACCATTAGTGGTCATGCCCGACACT
GCCCAGACCTTTGTGTTATCTGGGTTGATGCCCATGCTGACATCAACACACCCCTTACCACTTCATCAGGAAATCTCCAT
GGACAGCCAGTTTCATTTCTCCTCAGAGAACTACAGGACAAGGTACCACAACTCCCAGGATTTTCTTGGATCAAACCTTG
TATCTCTTCCCCAAGTATTGTGTATATTGGTCTAAGAGACGTAGATCCTCCCGAACATTTTATTTTAAAGAACTATGATA
TCCAGTATTTTTCCATGAGAGATATTGATCGACTTGGTATCCAGAAGGTCATGGAACAAACATTTGATCTGCTGATTGGC
AAGAGACAAAGACCAATCCATCTGAGTTTTGATATTGATGCATTTGACCCTACACTGGCTCCAGCCACAGGAACTCCTGT
GGTAGGAGGACTAACCTATCGAGAAGGGATGTATATTGCTGAGGAAATACACAATACAGGGTTGTTGTCGGCACTGGATC
TTGTAGAAGTCAATCCTCAGTTGGCCACCTCAGAGGAAGAGGCAAAGACTACAGCTAACCTGGCAGTGGATGTGATTGCT
TCAAGTTTTGGTCAGACAAGGGAAGGAGGGCACATTGTCTATGACCAACTTCCTACTCCCAGTTCACCAGATGAATCGGA
AAATCAAGCACGTGTGAGAATTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 5 .23 RPM |
| SRP051959_skeletal_muscle | 9 .46 RPM |
| SRP051959_lymph_node | 4 .75 RPM |
| SRP051959_lung | 4 .83 RPM |
| SRP051959_liver | 17 .61 RPM |
| SRP051959_kidney | 50 .56 RPM |
| SRP051959_heart | 4 .91 RPM |
| SRP051959_colon | 4 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000005722 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000007159 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000004808 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000081181 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005615 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009978 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000741 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000584 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005926 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006467 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_902 | 91.61 | 80.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1933 | 90.24 | 57.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_2357 | 60.70 | 70.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_2561 | 92.39 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000015277 retrocopies