Parental gene:

ENSCJAG00000014400

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:118173753..118215101(+)


>ENSCJAG00000014400
ATGGCGGCGGGGGCGGCTGCGGCGGCTGTAGGGGCCGTGGAGGAGGTCGGCTCAGTCGGGCAGTTTGAGGAGCTGCTGAG
CCTCAAAGCCAAGTCCCTCCTTGTGGTCCATTTCTGGGCACCATGGGCTCCACAATGTGCACAGATGAACGAAGTTATGG
CAGAGTTAGCTAAAGAACACCCTCAGGTTTCATTTGCGAAGTTGGAAGCTGAAGGTGTTCCTGAAGTATCTGAAAAATAT
GAAATTAGCTCTGTTCCCACGTTTCTGTTTTTCAAGAATTCTCAGAAAATCGACCGATTAGATGGTGCACATGCTCCAGA
GTTGACCAAAAAAGTTCAGCGACATGCATCTAGTGGCTCCTTCCCACCCAGCGCTAATGAACATCTTAAAGAAGATCTCA
ACCTGCGCTTGAAGAAATTGACTCGTGCTGCCCCCTGCATGCTGTTTATGAAAGGAACTCCTCAAGAACCACGCTGTGGT
TTCAGCAAGCAGATGGTGGAAATTCTTCACAAACATAATATTCAGTTTAGCAGTTTTGATATCTTCTCAGATGAAGAGGT
TCGACAGGGGCTCAAAACCTATTCCAATTGGCCTACCTATCCTCAGCTCTATGTTTCTGGAGAGCTCGTAGGAGGACTTG
ATATAATTAAGGAGCTAGAAGCATCTGAAGAACTAGATAAAATTTGTCCCAAAGCCCCCAAATTAGAGGAAAGGCTCAAA
GTGCTGACAAATAAAGCTTCTGTGATGCTCTTTATGAAAGGAAACAAACAGGAAGCAAAATGTGGATTCAGCAAACAAAT
TCTGGAAATACTAAATAGTACTGGTGTTGAATATGAAACATTCGATATATTGGAGGATGAAGAAGTTCGGCAGGGATTAA
AAGCTTACTCAAATTGGCCAACATACCCTCAGCTCTATGTGAAAGGGGAGCTTGTGGGAGGATTGGATATCGTGAAGGAA
CTGAAAGAAAATGGTGAATTGCTGCCTATACTGAGAGGAGAAAATTAA

Library Parental gene expression (RPM)
SRP051959_spleen 15 .34 RPM
SRP051959_skeletal_muscle 20 .31 RPM
SRP051959_lymph_node 16 .57 RPM
SRP051959_lung 15 .93 RPM
SRP051959_liver 16 .94 RPM
SRP051959_kidney 18 .48 RPM
SRP051959_heart 14 .49 RPM
SRP051959_colon 13 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003257 ortholog_many2many 1 retrogene
retro_amel_1348,
Bos taurus ENSBTAG00000005027 ortholog_one2many 1 retrogene
retro_btau_659,
Canis familiaris ENSCAFG00000013280 ortholog_one2many 1 retrogene
retro_cfam_285,
Dasypus novemcinctus ENSDNOG00000010387 ortholog_one2many 1 retrogene
retro_dnov_2110,
Gorilla gorilla ENSGGOG00000010771 ortholog_one2many 1 retrogene
retro_ggor_2308,
Microcebus murinus ENSMICG00000008544 ortholog_one2many 2 retrogenes
retro_mmur_1394, retro_mmur_89,
Myotis lucifugus ENSMLUG00000005483 ortholog_many2many 1 retrogene
retro_mluc_377,
Mus musculus ENSMUSG00000031068 ortholog_one2many 1 retrogene
retro_mmus_2480,
Nomascus leucogenys ENSNLEG00000027088 ortholog_one2many 2 retrogenes
retro_nleu_2322, retro_nleu_249,
Ochotona princeps ENSOPRG00000017309 ortholog_one2many 1 retrogene
retro_opri_462,
Pongo abelii ENSPPYG00000002768 ortholog_many2many 1 retrogene
retro_pabe_2830,
Pan troglodytes ENSPTRG00000003060 ortholog_one2many 1 retrogene
retro_ptro_2320,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_158 97.61 100.00
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Download FASTA sequences of all ENSCJAG00000014400 retrocopies