Parental gene: | MYL9, ENSCJAG00000012890 |
| Aliases: | None |
| Description: | myosin, light chain 9, regulatory [Source:HGNC Symbol;Acc:15754] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:657757..661774(-) |
>ENSCJAG00000012890
ATGTCCAGCAAGCGGGCCAAAGCCAAGACCACCAAGAAGCGGCCACAGCGGGCCACATCCAATGTCTTCGCAATGTTTGA
TCAGTCCCAGATCCAGGAGTTTAAGGAGGCTTTCAACATGATCGACCAGAACCGTGATGGCTTCATTGACAAGGAGGACC
TGCACGACATGCTGGCCTCACTGGGAAAGAACCCGACAGACGAATACCTGGAGGGCATGATGAGCGAGGCCCCAGGGCCC
ATCAACTTCACCATGTTCCTCACCATGTTTGGGGAGAAGCTCAACGGCACGGACCCCGAGGACGTGATCCGCAATGCCTT
TGCCTGCTTCGACGAGGAAGCCTCAGGTTTCATCCATGAGGACCACCTCCGGGAGCTGCTGACCACCATGGGTGATCGCT
TCACAGATGAGGAAGTGGACGAGATGTACCGGGAGGCACCCATTGACAAGAAAGGCAACTTCAACTATGTGGAGTTCACC
CGCATCCTCAAACATGGTGCCAAAGACAAAGACGACTAG
ATGTCCAGCAAGCGGGCCAAAGCCAAGACCACCAAGAAGCGGCCACAGCGGGCCACATCCAATGTCTTCGCAATGTTTGA
TCAGTCCCAGATCCAGGAGTTTAAGGAGGCTTTCAACATGATCGACCAGAACCGTGATGGCTTCATTGACAAGGAGGACC
TGCACGACATGCTGGCCTCACTGGGAAAGAACCCGACAGACGAATACCTGGAGGGCATGATGAGCGAGGCCCCAGGGCCC
ATCAACTTCACCATGTTCCTCACCATGTTTGGGGAGAAGCTCAACGGCACGGACCCCGAGGACGTGATCCGCAATGCCTT
TGCCTGCTTCGACGAGGAAGCCTCAGGTTTCATCCATGAGGACCACCTCCGGGAGCTGCTGACCACCATGGGTGATCGCT
TCACAGATGAGGAAGTGGACGAGATGTACCGGGAGGCACCCATTGACAAGAAAGGCAACTTCAACTATGTGGAGTTCACC
CGCATCCTCAAACATGGTGCCAAAGACAAAGACGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 15 .65 RPM |
| SRP051959_skeletal_muscle | 10 .70 RPM |
| SRP051959_lymph_node | 6 .21 RPM |
| SRP051959_lung | 21 .73 RPM |
| SRP051959_liver | 3 .25 RPM |
| SRP051959_kidney | 15 .00 RPM |
| SRP051959_heart | 97 .23 RPM |
| SRP051959_colon | 38 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000008540 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000038151 | within_species_paralog | 2 retrogenes | |
| Equus caballus | ENSECAG00000007545 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000101335 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000024477 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000207 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006109 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010971 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013458 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_637 | 89.86 | 80.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3193 | 75.14 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3195 | 77.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_3743 | 75.80 | 91.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012890 retrocopies