Parental gene: | DERL2, ENSCJAG00000011304 |
| Aliases: | LOC100400027, DERL2, derlin-2 |
| Description: | derlin 2 [Source:HGNC Symbol;Acc:17943] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:97612512..97625653(-) |
>ENSCJAG00000011304
ATGGCGTATCAGAGCCTGCGGCTGGAATACCTGCAGATCCCACCGGTCAGCCGCGCCTACACCACTGCCTGCGTCCTCAC
CACCGCAGCCGTGCAGTTGGAATTGATCACACCTTTTCAGTTGTACTTCAATCCTGAATTAATCTTTAAACACTTTCAAA
TATGGAGATTAATCACCAATTTCTTATTTTTTGGGCCAGTTGGATTCAATTTTTTATTTAACATGATTTTTCTATATCGT
TACTGTCGAATGCTAGAAGAAGGCTCTTTCCGGGGTCGGACAGCAGACTTTGTATTTATGTTCCTTTTTGGTGGATTCTT
AATGACCCTTTTTGGTTTGTTTGTGAGCTTAGTTTTCTTGGGCCAGGCCTTTACAATAATGCTCGTCTACGTGTGGAGCC
GAAGGAACCCCTATGTCCGCATGAACTTCTTCGGCCTTCTCAACTTCCAGGCCCCCTTTCTGCCCTGGGTGCTCATGGGG
TTTTCCTTGTTGTTGGGGAACTCGATCATTGTGGACCTTTTGGGTATTGCAGTTGGACACATATATTTTTTCTTGGAAGA
TGTATTTCCTAATCAGCCTGGTGGAATAAGAATTCTGAAAACACCATCTATCTTGAAAGCTATTTTTGATACACCAGATG
AGGATCCAAATTACAATCCACTACCTGAAGAACGGCCAGGAGGCTTTGCCTGGGGTGAGGGCCAGCGCCTCGGAGGTTAA
ATGGCGTATCAGAGCCTGCGGCTGGAATACCTGCAGATCCCACCGGTCAGCCGCGCCTACACCACTGCCTGCGTCCTCAC
CACCGCAGCCGTGCAGTTGGAATTGATCACACCTTTTCAGTTGTACTTCAATCCTGAATTAATCTTTAAACACTTTCAAA
TATGGAGATTAATCACCAATTTCTTATTTTTTGGGCCAGTTGGATTCAATTTTTTATTTAACATGATTTTTCTATATCGT
TACTGTCGAATGCTAGAAGAAGGCTCTTTCCGGGGTCGGACAGCAGACTTTGTATTTATGTTCCTTTTTGGTGGATTCTT
AATGACCCTTTTTGGTTTGTTTGTGAGCTTAGTTTTCTTGGGCCAGGCCTTTACAATAATGCTCGTCTACGTGTGGAGCC
GAAGGAACCCCTATGTCCGCATGAACTTCTTCGGCCTTCTCAACTTCCAGGCCCCCTTTCTGCCCTGGGTGCTCATGGGG
TTTTCCTTGTTGTTGGGGAACTCGATCATTGTGGACCTTTTGGGTATTGCAGTTGGACACATATATTTTTTCTTGGAAGA
TGTATTTCCTAATCAGCCTGGTGGAATAAGAATTCTGAAAACACCATCTATCTTGAAAGCTATTTTTGATACACCAGATG
AGGATCCAAATTACAATCCACTACCTGAAGAACGGCCAGGAGGCTTTGCCTGGGGTGAGGGCCAGCGCCTCGGAGGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 18 .21 RPM |
| SRP051959_skeletal_muscle | 9 .65 RPM |
| SRP051959_lymph_node | 14 .59 RPM |
| SRP051959_lung | 12 .49 RPM |
| SRP051959_liver | 23 .72 RPM |
| SRP051959_kidney | 14 .18 RPM |
| SRP051959_heart | 8 .54 RPM |
| SRP051959_colon | 14 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryctolagus cuniculus | ENSOCUG00000004811 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000009213 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000000394 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1540 | 84.10 | 99.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3886 | 79.78 | 76.57 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3980 | 81.44 | 81.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011304 retrocopies