Parental gene: | ATP1B1, ENSCJAG00000010317 |
| Aliases: | None |
| Description: | ATPase, Na+/K+ transporting, beta 1 polypeptide [Source:HGNC Symbol;Acc:804] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 18:37255067..37280725(-) |
>ENSCJAG00000010317
ATGGCCCGCGGGAAAGCCAAGGAGGAGGGCAGTTGGAAGAAATTCATCTGGAACTCAGAGAAGAAGGAGTTTTTGGGCAG
GACCGGTGGCAGTTGGTTTAAGATCCTTCTATTCTACGTAATATTTTATGGCTGCCTGGCTGGCATCTTCATCGGAACCA
TCCAAGTGATGCTTCTCACCATCAGTGAACTTAAGCCCACATATCAGGACCGAGTGGCCCCACCAGGATTAACACAGATT
CCTCAGATCCAGAAGACTGAAATTGCCTTTCGTCCTAATGATCCCAAGAGCTATGAGGCATATGTGCTGAACATAGTTAG
GTTCCTGGAAAAGTACAAAGATTCAGCCCAGAAGGAAGAGATGATTTTTGAAGATTGTGGCAATGTGCCCAGTGAACCCA
AAGAACGAGGAGACCTTAATCATGAACAAGGAGAGCGAAAGGTCTGCAGATTCAAGCTTGAGTGGCTGGGAAATTGCTCT
GGATTAAATGACGAAACTTATGGTTACAGAGAGGGCAAACCATGTATTATTATAAAGCTCAACCGAGTTCTCGGCTTCAA
ACCTAAGCCTCCCAAGAATGAGTCCTTGGAGACTTACCCAGTGATGAAGTATAACCCGTATGTCCTTCCCGTTCAGTGCA
CTGGCAAGCGAGATGAAGATAAGGAAAAAATTGGAAATGTGGAGTATTTCGGACTGGGCAACTACCCTGGTTTTCCTCTG
CAGTATTATCCCTACTATGGCAAACTCCTGCAGCCCAAATACCTGCAGCCCCTGCTGGCCGTACAGTTCACCAACCTCAC
CATGGACACTGAAATTCGCATAGAGTGTAAGGCGTACGGTGAGAACATTGGGTACAGTGAGAAAGACCGTTTTCAGGGAC
GTTTTGATGTAAAAATTGAAGTTAAGAGCTGA
ATGGCCCGCGGGAAAGCCAAGGAGGAGGGCAGTTGGAAGAAATTCATCTGGAACTCAGAGAAGAAGGAGTTTTTGGGCAG
GACCGGTGGCAGTTGGTTTAAGATCCTTCTATTCTACGTAATATTTTATGGCTGCCTGGCTGGCATCTTCATCGGAACCA
TCCAAGTGATGCTTCTCACCATCAGTGAACTTAAGCCCACATATCAGGACCGAGTGGCCCCACCAGGATTAACACAGATT
CCTCAGATCCAGAAGACTGAAATTGCCTTTCGTCCTAATGATCCCAAGAGCTATGAGGCATATGTGCTGAACATAGTTAG
GTTCCTGGAAAAGTACAAAGATTCAGCCCAGAAGGAAGAGATGATTTTTGAAGATTGTGGCAATGTGCCCAGTGAACCCA
AAGAACGAGGAGACCTTAATCATGAACAAGGAGAGCGAAAGGTCTGCAGATTCAAGCTTGAGTGGCTGGGAAATTGCTCT
GGATTAAATGACGAAACTTATGGTTACAGAGAGGGCAAACCATGTATTATTATAAAGCTCAACCGAGTTCTCGGCTTCAA
ACCTAAGCCTCCCAAGAATGAGTCCTTGGAGACTTACCCAGTGATGAAGTATAACCCGTATGTCCTTCCCGTTCAGTGCA
CTGGCAAGCGAGATGAAGATAAGGAAAAAATTGGAAATGTGGAGTATTTCGGACTGGGCAACTACCCTGGTTTTCCTCTG
CAGTATTATCCCTACTATGGCAAACTCCTGCAGCCCAAATACCTGCAGCCCCTGCTGGCCGTACAGTTCACCAACCTCAC
CATGGACACTGAAATTCGCATAGAGTGTAAGGCGTACGGTGAGAACATTGGGTACAGTGAGAAAGACCGTTTTCAGGGAC
GTTTTGATGTAAAAATTGAAGTTAAGAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 13 .09 RPM |
| SRP051959_skeletal_muscle | 48 .74 RPM |
| SRP051959_lymph_node | 4 .86 RPM |
| SRP051959_lung | 24 .03 RPM |
| SRP051959_liver | 52 .20 RPM |
| SRP051959_kidney | 315 .15 RPM |
| SRP051959_heart | 51 .78 RPM |
| SRP051959_colon | 74 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001981 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000143153 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002499 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001653 | ortholog_one2one | 1 retrogene | |
| Xiphophorus maculatus | ENSXMAG00000016407 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2288 | 70.68 | 90.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000010317 retrocopies