Parental gene:

ANP32E, ENSCJAG00000009710

Aliases:None
Description:acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:HGNC Symbol;Acc:16673]
Organism:Marmoset (Callithrix jacchus)
Coordinates:18:4184436..4212096(-)


>ENSCJAG00000009710
ATGGAGATGAAGAAGAAGATTAACCTGGAGTTAAGGAACAGAGCCCCGGAGGAGGTGACAGAGTTAGTCCTTGATAATTG
CCTGTGTGTCAATGGGGAAATTGAAGGCCTGAATGATACTTTCAAAGAACTAGAATTTCTGAGTATGGCTAATGTGGAAC
TGAGTTCACTGGCCCGGCTTCCCAGCTTAAATAAACTTCGAAAATTGGAGCTTAGTGACAATATAATTTCTGGAGGCTTA
GAAGTCCTGGCAGAGAAATGTCCAAATCTTACCTACCTCAATCTGAGTGGAAACAAAATAAAAGATCTCAGTACAGTAGA
AGCTCTGCAAAATCTTAAAAATTTGAAAAGTCTTGACCTGTTTAACTGTGAGATCACAAACCTGGAAGATTATAGAGAAA
GTATTTTTGAACTGCTGCAGCAAATCACATACTTAGATGGATTTGATCAGGAGGACAATGAAGCACCAGACTCTGAAGAG
GAGGACGACGAGGATGGAGACGAAGATGATGAAGAGGAAGAGGAAAATGAAGCTGGTCCACCTGAAGGATATGAGGAAGA
GGAGGAGGAAGAGGAAGAGGAGGATGAGGATGAGGATGAAGATGAAGGAGGTTCAGAGTTGGGAGAGGGAGAAGAGGAAG
TGGGTCTCTCATACTTAATGAAAGAAGAAATTCAGGATGAAGAAGATGATGATGACTATGTTGAAGAGGGAGAAGAAGAG
GAAGAAGAAGAAGAAGAAAGTCTTCGAGGGGAGAAGAGGAAACGAGATGCTGAAGATGATGGAGAGGAAGAAGACGACTA
G

Library Parental gene expression (RPM)
SRP051959_spleen 15 .08 RPM
SRP051959_skeletal_muscle 6 .49 RPM
SRP051959_lymph_node 20 .75 RPM
SRP051959_lung 15 .42 RPM
SRP051959_liver 4 .05 RPM
SRP051959_kidney 7 .99 RPM
SRP051959_heart 9 .96 RPM
SRP051959_colon 12 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002339 within_species_paralog 2 retrogenes
retro_cjac_3305, retro_cjac_3799,
Dipodomys ordii ENSDORG00000011690 ortholog_one2many 4 retrogenes
retro_dord_311, retro_dord_358, retro_dord_495, retro_dord_777,
Loxodonta africana ENSLAFG00000026778 ortholog_one2many 1 retrogene
retro_lafr_580,
Microcebus murinus ENSMICG00000015265 ortholog_many2many 1 retrogene
retro_mmur_115,
Monodelphis domestica ENSMODG00000027412 ortholog_one2many 2 retrogenes
retro_mdom_1802, retro_mdom_569,
Ochotona princeps ENSOPRG00000010058 possible_ortholog 3 retrogenes
retro_opri_1223, retro_opri_52, retro_opri_774,
Ictidomys tridecemlineatus ENSSTOG00000004170 possible_ortholog 5 retrogenes
retro_itri_1003, retro_itri_1031, retro_itri_1359, retro_itri_394, retro_itri_955,
Tupaia belangeri ENSTBEG00000001989 possible_ortholog 1 retrogene
retro_tbel_918,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2926 91.85 69.17
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000009710 retrocopies