Parental gene: | ENSCJAG00000009532 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:177468630..177474035(+) |
>ENSCJAG00000009532
ATGAGCGAGCTGCCCGCCGACGTGCGGGCCTTCCTGCGCGAGCATCCGAGCCTGCGGCTGCAGCCGGACTCCCGCAAGGT
GAGGTGCATCCTGACGGGTCACGAGCTGCCCTGCCGCCTGCCGGAGCTCCAGGTCTACACCCGCGGCAAGAAGTACCAGC
GGCTGGTCCGCGCTTCCCCGGCGTTCGACTATGCAGAGTTTGAACCTCACATCGTGCCCAGCACTAAGAACCCGTNCCAG
TTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACATCCAGGGCCGGCGGTACCA
GAGAGCTCTGGATAAATATGCAGAATGTCAGAAGCAAGGGCTGGAGTATGTCCCTGCGTGCCTGGTGCACCGGAGAAAGA
GGGAGGACCAGATGGACGGTGATGGGCCTCGCTCATGGGAAGCCTTCTGGGAGCCCATGTCCAGTGATGAGGGGGGAGCT
CCGAGTGACGACAGCATGACAGACCTGTACCCACCTGAGCTATTCACCAGAAAGGACCTTGGAAACACAGAGGACATGGA
TGGCACTGATGACTTTTTGACAGATGAAGAGGACGAGGAGACAAAGCCCCTAAGACAGTCCACTGGCAGGAGGGAGACGG
ACGTGGACTGGGGGCTGGTCCGAAAGCGCAGGAAGAAGCAGTTGGGCTCATTGAAAAAGAAGTTCAAGAGTCATCCCCGC
AAACCTAAGAGCTTCAGCTCCTGTAAACAGCCAGGT
ATGAGCGAGCTGCCCGCCGACGTGCGGGCCTTCCTGCGCGAGCATCCGAGCCTGCGGCTGCAGCCGGACTCCCGCAAGGT
GAGGTGCATCCTGACGGGTCACGAGCTGCCCTGCCGCCTGCCGGAGCTCCAGGTCTACACCCGCGGCAAGAAGTACCAGC
GGCTGGTCCGCGCTTCCCCGGCGTTCGACTATGCAGAGTTTGAACCTCACATCGTGCCCAGCACTAAGAACCCGTNCCAG
TTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACATCCAGGGCCGGCGGTACCA
GAGAGCTCTGGATAAATATGCAGAATGTCAGAAGCAAGGGCTGGAGTATGTCCCTGCGTGCCTGGTGCACCGGAGAAAGA
GGGAGGACCAGATGGACGGTGATGGGCCTCGCTCATGGGAAGCCTTCTGGGAGCCCATGTCCAGTGATGAGGGGGGAGCT
CCGAGTGACGACAGCATGACAGACCTGTACCCACCTGAGCTATTCACCAGAAAGGACCTTGGAAACACAGAGGACATGGA
TGGCACTGATGACTTTTTGACAGATGAAGAGGACGAGGAGACAAAGCCCCTAAGACAGTCCACTGGCAGGAGGGAGACGG
ACGTGGACTGGGGGCTGGTCCGAAAGCGCAGGAAGAAGCAGTTGGGCTCATTGAAAAAGAAGTTCAAGAGTCATCCCCGC
AAACCTAAGAGCTTCAGCTCCTGTAAACAGCCAGGT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 1 .72 RPM |
| SRP051959_skeletal_muscle | 4 .91 RPM |
| SRP051959_lymph_node | 3 .01 RPM |
| SRP051959_lung | 1 .90 RPM |
| SRP051959_liver | 3 .40 RPM |
| SRP051959_kidney | 2 .29 RPM |
| SRP051959_heart | 1 .89 RPM |
| SRP051959_colon | 1 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000019763 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000028927 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012766 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3362 | 87.50 | 95.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3452 | 87.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3606 | 87.08 | 93.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_3648 | 80.08 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_3914 | 87.16 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000009532 retrocopies