Parental gene: | STOML2, ENSCJAG00000009137 |
| Aliases: | None |
| Description: | stomatin (EPB72)-like 2 [Source:HGNC Symbol;Acc:14559] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:136825276..136829366(-) |
>ENSCJAG00000009137
ATGCTGGCGCGCGCGGCGCGGGGCACTGGGGCCCTTTTGCTGAGGGGCTCTCTACAGGCTTCCGGCCGCGCTCCGCGCCG
CGCCTCCTCTGGATTGCCCCGAAACACCGTGGTACTGTTTGTGCCACAGCAGGAGGCCTGGGTGGTGGAGCGAATGGGCC
GATTCCATCGGATCCTGGAGCCTGGTTTGAACATCCTCATCCCTGTGTTAGACCGGATCCGATATGTGCAGAGTCTCAAG
GAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTCTCGACAATGTAACTCTGCAAATCGATGGAGTCCTTTACCT
GCGCATCATGGACCCTTACAAGGCAAGCTATGGTGTGGAGGACCCCGAGTATGCTGTCACCCAGCTAGCTCAGACAACCA
TGAGATCAGAGCTCGGCAAACTCTCTCTGGACAAAGTCTTCCGGGAACGGGAGTCCCTGAATGCGAGCATTGTGGATGCC
ATCAACCAGGCTGCTGACTGCTGGGGTATCCGCTGCCTTCGTTATGAGATCAAGGATATCCATGTGCCACCCCGGGTGAA
AGAGTCTATGCAGATGCAGGTGGAGGCAGAACGGCGGAAACGGGCCACAGTTCTAGAGTCTGAGGGGACCCGAGAGTCGG
CCATCAACGTGGCAGAGGGGAAGAAACAGGCCCAGATCCTGGCCTCTGAAGCAGAAAAGGCTGAACAGATAAATCAAGCA
GCAGGAGAAGCCAGTGCAGTTCTGGCCAAGGCGAAGGCTAAAGCTGAAGCTATTCGAATCTTGGCTGCAGCTCTGACACA
ACATAATGGAGATGCAGCAGCTTCACTGACTGTGGCGGAGCAGTATGTCAGCGCATTCTCCAAACTGGCCAAGGACTCCA
ACACTATCCTACTGCCCTCCAACCCTGGCGATGTCACAAGCATGGTGGCTCAGGCCATGGGTGTATATGGAGCCCTCACC
AAAGCCCCAGCACCAGGGGATCCACACTCGGTCTCCAGTGGGAGTAGCAGAGATGTCCAGAGTACAGATGCAAGTCTTGA
TGAGGAACTTGATCGAGTCAAATTGAGTTAG
ATGCTGGCGCGCGCGGCGCGGGGCACTGGGGCCCTTTTGCTGAGGGGCTCTCTACAGGCTTCCGGCCGCGCTCCGCGCCG
CGCCTCCTCTGGATTGCCCCGAAACACCGTGGTACTGTTTGTGCCACAGCAGGAGGCCTGGGTGGTGGAGCGAATGGGCC
GATTCCATCGGATCCTGGAGCCTGGTTTGAACATCCTCATCCCTGTGTTAGACCGGATCCGATATGTGCAGAGTCTCAAG
GAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTCTCGACAATGTAACTCTGCAAATCGATGGAGTCCTTTACCT
GCGCATCATGGACCCTTACAAGGCAAGCTATGGTGTGGAGGACCCCGAGTATGCTGTCACCCAGCTAGCTCAGACAACCA
TGAGATCAGAGCTCGGCAAACTCTCTCTGGACAAAGTCTTCCGGGAACGGGAGTCCCTGAATGCGAGCATTGTGGATGCC
ATCAACCAGGCTGCTGACTGCTGGGGTATCCGCTGCCTTCGTTATGAGATCAAGGATATCCATGTGCCACCCCGGGTGAA
AGAGTCTATGCAGATGCAGGTGGAGGCAGAACGGCGGAAACGGGCCACAGTTCTAGAGTCTGAGGGGACCCGAGAGTCGG
CCATCAACGTGGCAGAGGGGAAGAAACAGGCCCAGATCCTGGCCTCTGAAGCAGAAAAGGCTGAACAGATAAATCAAGCA
GCAGGAGAAGCCAGTGCAGTTCTGGCCAAGGCGAAGGCTAAAGCTGAAGCTATTCGAATCTTGGCTGCAGCTCTGACACA
ACATAATGGAGATGCAGCAGCTTCACTGACTGTGGCGGAGCAGTATGTCAGCGCATTCTCCAAACTGGCCAAGGACTCCA
ACACTATCCTACTGCCCTCCAACCCTGGCGATGTCACAAGCATGGTGGCTCAGGCCATGGGTGTATATGGAGCCCTCACC
AAAGCCCCAGCACCAGGGGATCCACACTCGGTCTCCAGTGGGAGTAGCAGAGATGTCCAGAGTACAGATGCAAGTCTTGA
TGAGGAACTTGATCGAGTCAAATTGAGTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 10 .23 RPM |
| SRP051959_skeletal_muscle | 19 .37 RPM |
| SRP051959_lymph_node | 9 .13 RPM |
| SRP051959_lung | 9 .65 RPM |
| SRP051959_liver | 19 .10 RPM |
| SRP051959_kidney | 12 .22 RPM |
| SRP051959_heart | 9 .73 RPM |
| SRP051959_colon | 10 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ciona intestinalis | ENSCING00000000485 | possible_ortholog | 1 retrogene | |
| Ciona savignyi | ENSCSAVG00000000950 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000005517 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028455 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006451 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_440 | 90.71 | 62.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000009137 retrocopies