Parental gene: | PLIN2, ENSCJAG00000008088 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:121432305..121444381(+) |
>ENSCJAG00000008088
GTCTCAGCGAGCCGGTCCGGAGCCCCCAGCGGCGCCCAGATGGGGTACAGTATCGAAAGGGAAATGCTTCAGAAAAGTGT
GGTGACTCGGGTGGTCAACCTGCCCTTGGTGAGCTCCACATATGGCCTCATGTCCTCAGCCTATGTCAATACAAAGGACC
AGTATCCCTACTTGAAGTCTGTGTGTGAGATGGCAGAGAAGGGCGTGAAGACCATCACCTCAGTGGCCCTGACCAGTGCT
CTGCCCATCATCCAGAAGCTAGAGCCGCAAATTGCAGTTGCCAATACCTATGCCTGTAAAGGGCTAGACAGGATGGAGGA
GAGACTGCCTATTCTGAATCAGCCATCAACTCAGGTTGTTGCCAATGCCAAAGGTGCTATGACTGGGGCAAAAGATGCTG
TGACGACTACTGTTACTGGGGCCAAGGATTCTGTGGCCAGCACGATCACAGGGGTGATGGACAAGACCAAAGGGGCAGTG
ACTGGCAGTGTGGAGAAGACCAAGTCTGTGGTCAGTGGCAGCATTAACACAGTCTTGGGGAGTCGGATGATGCAGCTTGT
GAGCAGTGGCGTAGAAAATGCACTCACCAAATCAGAGCTGTTGGTAGAGCAGTACCTCCCTCTCACTGAAGAAGAACTAG
AAAAAGAAGCAAAAAAAGTTGAAGGATTTGATATGGTTCAGAAGCCAAGTTATTATGTTAGACTGGGATCCCTGTCTACC
AAGCTTCGCTCCCGTGCCTACCAGCAGGCTCTCAGCAGGGTTAAAGAAGCTAAGCAAAAAAGCCAAGAGACCATTTCTCA
GCTCCATTCTACTGTTCAGCTGATTGAATTTGCCAGGAAGAATGTGCATAATACCAATCAGAGAATTCAGGATGCTCAGG
ATAAACTCTACCTCTCATGGGTGGAGTGGAAAAGGAGCATTGGGTATGAT
GTCTCAGCGAGCCGGTCCGGAGCCCCCAGCGGCGCCCAGATGGGGTACAGTATCGAAAGGGAAATGCTTCAGAAAAGTGT
GGTGACTCGGGTGGTCAACCTGCCCTTGGTGAGCTCCACATATGGCCTCATGTCCTCAGCCTATGTCAATACAAAGGACC
AGTATCCCTACTTGAAGTCTGTGTGTGAGATGGCAGAGAAGGGCGTGAAGACCATCACCTCAGTGGCCCTGACCAGTGCT
CTGCCCATCATCCAGAAGCTAGAGCCGCAAATTGCAGTTGCCAATACCTATGCCTGTAAAGGGCTAGACAGGATGGAGGA
GAGACTGCCTATTCTGAATCAGCCATCAACTCAGGTTGTTGCCAATGCCAAAGGTGCTATGACTGGGGCAAAAGATGCTG
TGACGACTACTGTTACTGGGGCCAAGGATTCTGTGGCCAGCACGATCACAGGGGTGATGGACAAGACCAAAGGGGCAGTG
ACTGGCAGTGTGGAGAAGACCAAGTCTGTGGTCAGTGGCAGCATTAACACAGTCTTGGGGAGTCGGATGATGCAGCTTGT
GAGCAGTGGCGTAGAAAATGCACTCACCAAATCAGAGCTGTTGGTAGAGCAGTACCTCCCTCTCACTGAAGAAGAACTAG
AAAAAGAAGCAAAAAAAGTTGAAGGATTTGATATGGTTCAGAAGCCAAGTTATTATGTTAGACTGGGATCCCTGTCTACC
AAGCTTCGCTCCCGTGCCTACCAGCAGGCTCTCAGCAGGGTTAAAGAAGCTAAGCAAAAAAGCCAAGAGACCATTTCTCA
GCTCCATTCTACTGTTCAGCTGATTGAATTTGCCAGGAAGAATGTGCATAATACCAATCAGAGAATTCAGGATGCTCAGG
ATAAACTCTACCTCTCATGGGTGGAGTGGAAAAGGAGCATTGGGTATGAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 9 .56 RPM |
| SRP051959_skeletal_muscle | 20 .44 RPM |
| SRP051959_lymph_node | 5 .80 RPM |
| SRP051959_lung | 7 .26 RPM |
| SRP051959_liver | 9 .18 RPM |
| SRP051959_kidney | 60 .90 RPM |
| SRP051959_heart | 10 .28 RPM |
| SRP051959_colon | 7 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002827 | ortholog_one2many | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000017943 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2494 | 90.49 | 99.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000008088 retrocopies