Parental gene: | ENSCJAG00000007852 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:134593075..134612241(-) |
>ENSCJAG00000007852
ATGTCGGGGTACACTCCGGATGAGAAACTGCGGCAGCAGCAGCTGCGAGCGCTGAGAAGGCAATGGCTAAAGGACCAGGA
GCTGAGCCCTCGGGAGCCGGTGCTGCCCCCAGAGGCGACGTGGCCTATGGACAGATTCTGGGATAAGTTTTTGGCAAATA
AGTCCCCTTGGAGGAACATGGTCTATAAGGTATACCGAAAGAGTATGTTTATTTTTACTTGTGTACTTATTCCTGCCTGG
ATTGTTCATTATTACGTGAAATATCATGTGGCTACAAAACCATATGCCATCGTTCAGTCGAAGCCCAGAATATTCCCAGG
TGATACAATTGTGGAGACCGGAGAAGTAATTCCACCAATGAAAGAATTTCCTGATCAACATCATTAA
ATGTCGGGGTACACTCCGGATGAGAAACTGCGGCAGCAGCAGCTGCGAGCGCTGAGAAGGCAATGGCTAAAGGACCAGGA
GCTGAGCCCTCGGGAGCCGGTGCTGCCCCCAGAGGCGACGTGGCCTATGGACAGATTCTGGGATAAGTTTTTGGCAAATA
AGTCCCCTTGGAGGAACATGGTCTATAAGGTATACCGAAAGAGTATGTTTATTTTTACTTGTGTACTTATTCCTGCCTGG
ATTGTTCATTATTACGTGAAATATCATGTGGCTACAAAACCATATGCCATCGTTCAGTCGAAGCCCAGAATATTCCCAGG
TGATACAATTGTGGAGACCGGAGAAGTAATTCCACCAATGAAAGAATTTCCTGATCAACATCATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 9 .47 RPM |
| SRP051959_skeletal_muscle | 45 .14 RPM |
| SRP051959_lymph_node | 8 .06 RPM |
| SRP051959_lung | 7 .84 RPM |
| SRP051959_liver | 26 .64 RPM |
| SRP051959_kidney | 27 .09 RPM |
| SRP051959_heart | 29 .71 RPM |
| SRP051959_colon | 13 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000001263 | ortholog_one2many | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000019864 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000007428 | ortholog_one2many | 5 retrogenes | |
| Sus scrofa | ENSSSCG00000011003 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013268 | ortholog_one2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000002785 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012172 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_255 | 91.41 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_303 | 94.53 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_1287 | 86.61 | 98.44 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000007852 retrocopies