Parental gene:

ENSCJAG00000007716

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:14:84489158..84497991(+)


>ENSCJAG00000007716
ATGGCGATGCAAGCGGCCAAGAGGGCGAACATTCGACTTCCACCTGAAGTAAATCGAATATTGTATATAAGAAATTTGCC
ATACAAAATCACAGCTGAAGAAATGTATGATATATTTGGGAAATATGGACCTATTCGTCAGATCAGAGTGGGGAACACAC
CTGAAACTAGAGGAACAGCTTATGTGGTCTATGAGGACATCTTTGATGCCAAGAATGCATGTGATCACCTATCAGGATTC
AATGTTTGTAACAGATACCTTGTGGTTTTGTACTATAATGCCAACAGGGCATTTCAGAAGATGGACACAAAGAAGAAGGA
GGAACAGTTGAAGCTTCTCAAGGAGAAGTATGGCATCAACACAGATCCACCAAAATAA

Library Parental gene expression (RPM)
SRP051959_spleen 12 .94 RPM
SRP051959_skeletal_muscle 11 .97 RPM
SRP051959_lymph_node 11 .23 RPM
SRP051959_lung 11 .81 RPM
SRP051959_liver 21 .77 RPM
SRP051959_kidney 13 .51 RPM
SRP051959_heart 10 .38 RPM
SRP051959_colon 10 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002786 ortholog_one2one 1 retrogene
retro_amel_1594,
Bos taurus ENSBTAG00000003407 ortholog_one2one 1 retrogene
retro_btau_606,
Choloepus hoffmanni ENSCHOG00000000689 ortholog_one2one 3 retrogenes
retro_chof_1217, retro_chof_2457, retro_chof_351,
Dasypus novemcinctus ENSDNOG00000007148 ortholog_one2one 1 retrogene
retro_dnov_1313,
Equus caballus ENSECAG00000015618 ortholog_one2one 1 retrogene
retro_ecab_733,
Felis catus ENSFCAG00000031365 ortholog_one2one 1 retrogene
retro_fcat_247,
Homo sapiens ENSG00000115128 ortholog_one2one 1 retrogene
retro_hsap_1773,
Macaca mulatta ENSMMUG00000001282 ortholog_one2one 1 retrogene
retro_mmul_1262,
Mustela putorius furo ENSMPUG00000013957 ortholog_one2one 1 retrogene
retro_mputfur_882,
Nomascus leucogenys ENSNLEG00000000815 ortholog_one2one 1 retrogene
retro_nleu_2806,
Otolemur garnettii ENSOGAG00000004468 ortholog_one2one 1 retrogene
retro_ogar_2877,
Pongo abelii ENSPPYG00000012603 ortholog_one2one 2 retrogenes
retro_pabe_1098, retro_pabe_1461,
Pan troglodytes ENSPTRG00000011709 ortholog_one2one 1 retrogene
retro_ptro_1187,
Sorex araneus ENSSARG00000011902 ortholog_one2one 1 retrogene
retro_sara_638,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_487 74.02 100.00
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2. retro_cjac_2632 84.68 99.20
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Download FASTA sequences of all ENSCJAG00000007716 retrocopies