Parental gene:

UGP2, ENSCJAG00000006960

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:14:43086772..43150161(-)


>ENSCJAG00000006960
ATGTTCCTTTACCCTGCTGGGTTTAGTTTTGCCTCCCTGAAATCAGATCTTAGCAAAGCAATGTCTCAAGATGGCGCTTC
TCAGTTCCAAGAAGTCATTCGGCAAGAGCTAGAATTATCTGTGAAGAAGGAACTAGAAAAAATACTCACCACGGCATCAT
CACATGAGTTTGAGCACACTAAAAAAGACCTGGATGGATTTCGGAAGCTATTTCATCGATTTTTGCAAGAAAAGGGGCCT
TCTGTGGATTGGGGAAAAATTCAGAGACCTCCAGAAGATTCGATTCAACCCTATGAAAAGATAAAGGCCAGGGGCTTGCC
TGATAATATATCTTCTGTGTTGAACAAACTAGTGGTGGTGAAACTTAATGGTGGTTTGGGAACCAGCATGGGCTGCAAAG
GCCCTAAAAGTCTTATTGGTGTGAGGAATGAGAATACCTTTCTGGATCTGACTGTTCAGCAAATTGAACATTTGAATAAA
ACCTACAATACAGATGTTCCTCTTGTTTTAATGAACTCTTTTAACACGGATGAAGATACCAAAAAAATACTACAGAAGTA
CAATCATTGTCGTGTGAAAATCTACACTTTTAATCAAAGCAGGTACCCGAGGATTAATAAGGAATCTTTACTTCCTGTAG
CAAAGGACGTGTCTTACTCAGGGGAAAATACAGAAGCTTGGTACCCTCCAGGTCATGGTGATATTTACGCCAGTTTCTAC
AACTCTGGTTTGCTTGATACCTTCATAGGAGAAGGCAAAGAGTATATTTTTGTGTCTAACATAGATAATCTGGGCGCCAC
AGTGGACCTGTATATTCTTAATCATCTAATGAACCCACCCAATGGAAAACGCTGTGAATTTGTCATGGAAGTCACAAATA
AAACACGTGCTGATGTAAAGGGCGGGACACTCACTCAATATGAAGGCAAACTGAGACTGGTGGAAATTGCTCAAGTGCCA
AAAGCACATGTTGATGAGTTCAAGTCTGTATCAAAGTTCAAAATATTTAACACAAACAACCTATGGATTTCTCTTGGAGC
AGTTAAAAGACTGCAGGAGCAGAATGCCATTGACATGGAAATCATTGTGAATGCAAAGACTTTGGATGGAGGCCTGAATG
TCATTCAGTTAGAAACTGCAGTAGGGGCTGCCATCAAAAGTTTTGAGAATTCTCTAGGTATTAATGTGCCAAGGAGCCGT
TTTCTGCCTGTCAAAACCACATCAGATCTCTTGCTGGTGATGTCAAACCTCTATAGCCTTAATGCAGGATCTCTGACAAT
GAGTGAAAAGCGGGAATTTCCTACAGTGCCGTTGGTTAAATTAGGCAGTTCTTTTACAAAGGTTCAAGATTATCTAAGAA
GATTTGAAAGTATACCAGATATGCTTGAATTGGATCACCTCACAGTTTCAGGAGATGTGACATTTGGAAAGAATGTTTCC
TTAAAGGGAACTGTTATCATTATTGCAAATCATGGTGACAGAATTGACATCCCACCTGGAGCAGTATTAGAGAACAAGAT
TGTATCTGGGAACCTTCGCATCTTGGACCACTGA

Library Parental gene expression (RPM)
SRP051959_spleen 36 .81 RPM
SRP051959_skeletal_muscle 347 .75 RPM
SRP051959_lymph_node 32 .01 RPM
SRP051959_lung 36 .49 RPM
SRP051959_liver 394 .68 RPM
SRP051959_kidney 36 .54 RPM
SRP051959_heart 85 .37 RPM
SRP051959_colon 57 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008459 ortholog_one2one 1 retrogene
retro_cpor_811,
Microcebus murinus ENSMICG00000006509 ortholog_one2one 1 retrogene
retro_mmur_1277,
Oryctolagus cuniculus ENSOCUG00000002137 ortholog_one2one 1 retrogene
retro_ocun_815,
Tursiops truncatus ENSTTRG00000000694 ortholog_one2one 1 retrogene
retro_ttru_56,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1709 92.09 99.02
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Download FASTA sequences of all ENSCJAG00000006960 retrocopies