Parental gene:

E2F6, ENSCJAG00000006910

Aliases:None
Description:E2F transcription factor 6 [Source:HGNC Symbol;Acc:3120]
Organism:Marmoset (Callithrix jacchus)
Coordinates:14:97117482..97138412(+)


>ENSCJAG00000006910
ATGAGTCAGCAGCGGCCAGCGAGGAAGTTGCCCAGTCTCCTACTGGACCCGGCGGAGGAGACAGTTCGCCGTCGGTGCCG
AGACCCTATCAACGTGGAGGGCCTGCTGCCATCAAAAATAAGGATTAATTTAGAAGATAACGTACAATATGTGTCCATGA
GAAAAGCCCTAAAAGTGAAGAGACCTCGTTTTGATGTATCACTGGTTTATTTAACTCGAAAGTTTATGGACCTTGTCAGA
TCTGCCCCGGGGGGTATTCTGGACTTAAATAAGGTTGCAACAAAACTGGGAGTCCGGAAGCGGAGGGTTTATGACATCAC
CAATGTCTTAGACGGCATCGAACTCGTTGAAAAAAAATCCAAGAATCACATTCGGTGGATAGGATCTGATCTTAGCAATT
TTGGAGCAGTTCCTCAACAAAAGAAGCTGCAGGAGGAACTTTCTGACTTATCAGCAATGGAAGATGCTTTGGATGAGTTA
ATTAAGGATTGTGCTCAGCAGCTGTTTGCGTTAACAGATGACAAAGAAAATGGAAGACTAGCATATGTGACATATCAAGA
CATTCATAGCATTCAGGCCTTCCACGAACAGATCGTCATTGCAGTCAAAGCTCCAGCAGAAACCAGATTGGATGTTCCGG
CTCCCAGAGAAGACTCCATCACAGTGCATATAAGGAGCACCAAAGGACCTATCGACGTCTATTTGTGTGAAGTGGAGCAG
GCTCAGACAGGTAACAAAAGGGCTGAAGGTGTCGGGACTTCTTCATCTGAGAGCACACATCCAGAACGCCCTGAGGAGGA
AGAAAATCCTCAGCAAAGTGAAGAGTTGCTTGAAGTAAGCAACTGA

Library Parental gene expression (RPM)
SRP051959_spleen 8 .40 RPM
SRP051959_skeletal_muscle 11 .44 RPM
SRP051959_lymph_node 7 .47 RPM
SRP051959_lung 7 .34 RPM
SRP051959_liver 3 .83 RPM
SRP051959_kidney 7 .90 RPM
SRP051959_heart 9 .98 RPM
SRP051959_colon 5 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000048286 ortholog_one2one 1 retrogene
retro_btau_1820,
Dasypus novemcinctus ENSDNOG00000000258 ortholog_one2one 1 retrogene
retro_dnov_187,
Homo sapiens ENSG00000169016 ortholog_one2one 4 retrogenes
retro_hsap_2542, retro_hsap_2547, retro_hsap_2572, retro_hsap_4906,
Macropus eugenii ENSMEUG00000007957 ortholog_one2many 4 retrogenes
retro_meug_1169, retro_meug_860, retro_meug_882, retro_meug_893,
Myotis lucifugus ENSMLUG00000003384 ortholog_one2many 1 retrogene
retro_mluc_864,
Macaca mulatta ENSMMUG00000023225 ortholog_one2one 1 retrogene
retro_mmul_87,
Nomascus leucogenys ENSNLEG00000014134 ortholog_one2one 1 retrogene
retro_nleu_2351,
Pongo abelii ENSPPYG00000012646 ortholog_one2one 1 retrogene
retro_pabe_1,
Pan troglodytes ENSPTRG00000011661 ortholog_one2one 2 retrogenes
retro_ptro_1484, retro_ptro_3272,
Ictidomys tridecemlineatus ENSSTOG00000003316 ortholog_one2one 1 retrogene
retro_itri_135,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_178 52.33 91.81
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Download FASTA sequences of all ENSCJAG00000006910 retrocopies