Parental gene: | METTL5, ENSCJAG00000006777 |
| Aliases: | None |
| Description: | methyltransferase like 5 [Source:HGNC Symbol;Acc:25006] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:48760633..48781928(+) |
>ENSCJAG00000006777
ATGAAGAAATTAAGGCTTAAGGAACTAGAGAGTCGCCTGCAACAAGTGGATGAATTCGAAAAGCCCAAGCTGCTTCTAGA
ACAGTATCCCACCAGGCCGCACATTGCAGCATGTATGCTGTATACAATCCATAACACTTATGATGACATTGAAAATAAAG
TCATTGCCGATCTAGGATGTGGCTGTGGAGTACTTAGCATCGGAAGTGCAATGTTAGGAGCAGGGTTGTGTGTTGGATTT
GACATAGATGAAGACGCATTGGAAATATTTAACAGGAATGTGGAAGAGTTTGAGTTAACAAATATTGACATGATTCAATG
TGATGTGTGCTTATTATCTAACAGAATGTCCAAGTCATTTGATACAGTAATTATGAATCCTCCCTTTGGAACCAAAAATA
ATAAAGGGACAGATATGACTTTTCTAAAGACTGCTCTGGAAATGGCAAGAACAGCAGTATATTCTTTACACAAATCCTCA
ACTAGAGAACATATTCAAAAGAAAGCTGCAGAATGGAAAATCAAGATAGATATTATTGCAGTACAAAGATTATCTGGCAA
AAAGACTTACTTGAAAAGTATTAGCAGGTCTGTGTCTTTGTACTTCTGGCCAGGGTCTCACTCTGTCACTCAGGTTGGAC
TGCACCGGGTGTGGTGGTATGCTCCCGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATTGTTTGAACGCAGGAGG
CGGAGGCTGCAGTGA
ATGAAGAAATTAAGGCTTAAGGAACTAGAGAGTCGCCTGCAACAAGTGGATGAATTCGAAAAGCCCAAGCTGCTTCTAGA
ACAGTATCCCACCAGGCCGCACATTGCAGCATGTATGCTGTATACAATCCATAACACTTATGATGACATTGAAAATAAAG
TCATTGCCGATCTAGGATGTGGCTGTGGAGTACTTAGCATCGGAAGTGCAATGTTAGGAGCAGGGTTGTGTGTTGGATTT
GACATAGATGAAGACGCATTGGAAATATTTAACAGGAATGTGGAAGAGTTTGAGTTAACAAATATTGACATGATTCAATG
TGATGTGTGCTTATTATCTAACAGAATGTCCAAGTCATTTGATACAGTAATTATGAATCCTCCCTTTGGAACCAAAAATA
ATAAAGGGACAGATATGACTTTTCTAAAGACTGCTCTGGAAATGGCAAGAACAGCAGTATATTCTTTACACAAATCCTCA
ACTAGAGAACATATTCAAAAGAAAGCTGCAGAATGGAAAATCAAGATAGATATTATTGCAGTACAAAGATTATCTGGCAA
AAAGACTTACTTGAAAAGTATTAGCAGGTCTGTGTCTTTGTACTTCTGGCCAGGGTCTCACTCTGTCACTCAGGTTGGAC
TGCACCGGGTGTGGTGGTATGCTCCCGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATTGTTTGAACGCAGGAGG
CGGAGGCTGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .94 RPM |
| SRP051959_skeletal_muscle | 4 .13 RPM |
| SRP051959_lymph_node | 3 .58 RPM |
| SRP051959_lung | 2 .80 RPM |
| SRP051959_liver | 3 .90 RPM |
| SRP051959_kidney | 4 .50 RPM |
| SRP051959_heart | 3 .42 RPM |
| SRP051959_colon | 2 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012438 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013460 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000022484 | possible_ortholog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000018044 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000002154 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_729 | 70.39 | 72.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2282 | 64.06 | 51.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006777 retrocopies