Parental gene: | QRSL1, ENSCJAG00000006200 |
| Aliases: | None |
| Description: | Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F7HUD4] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:106128733..106163351(+) |
>ENSCJAG00000006200
ATGCTGGGCCAGACGCTCCGAGAAGTTTCTGCGGCACTGAAACAAGGCCAAATTACACCAACAGAGCTCTGTCAAAAATG
TCTTTCTCTTATCAAGAAGACCAAGTTTCTGAATGCCTACATTACTGTATCAGAAGAGGTGGCCTTAAAACAAGCTGAAG
AATCAGAAAAGAGATATAAGAATGGACAGTCTCTTGGGGATTTAGATGGAATTCCTATTGCAGTAAAAGACAACTTTAGT
ACATCTGGCATTGAGACAACATGTGCATCAAATATGCTGAAAGGTTATGTACCACCTTATAATGCTACAGTAGTTCAGAA
GTTGTTGGATCAGGGAGCTCTACTAATGGGAAAAACAAATTTAGATGAATTTGCTATGGGATCTGGAAGCACAGATGGTG
TATTTGGACCAGTTAAAAACCCCTGGAGTTATTCAAAACAATATAGAGAAAAAAGGAAGCAGAATCCCCACAGCGAGAGT
GGAGATTCAGACTGGCTGATAACTGGAGGAAGCTCAGGTGGGAGTGCAGCTGCCGTGTCTGCGTTCACATGCTATGCGGC
TTTAGGATCGGATACAGGAGGATCCACCAGAAATCCTGCTGCCCACTGTGGGCTTGTTGGTTTCAAACCAAGCTATGGCT
TAGTTTCCCGTCATGGTCTCATTCCCCTGGTGAATTCGATGGATGTGCCAGGAATCTTAACCAGATATGTGGATGATGCA
GCAATTGTGTTGGGTGTACTGGCTGGACATGACCCCAAGGATTCTACCACAGTACCTATTAATAAACCACTTGTGCTTTC
CAGTTTGGAAGATGTGAGCAAACTATGTATAGGAATTCCAAAGGAATATCTTGTACCAGAATTATCAAGTGAAATACAGT
CTCTTTGGTCCAGAGCTGCTGACCTCTTTGAGTCTGAGGGGGCCAAAGTAATTGAAGTATCCCTTCCTCACACCAGTTAT
TCAATTGTCTGCTACCATGTGTTGTGTACATCAGAAGTGGCATCAAATATGGCAAGATTTGATGGGCTACAATATGGTCA
CAGATGTGACATTGATGTGTCCACTGAAGCCATGTATGCTGCAACCAGACGAGAGGGGTTCAATGATGTGGTGAGAGGAA
GAATTCTCTCAGGAAACTTTTTCTTATTAAAAGAAAACTATGAAAATTATTTCGTCAAAGCACAGAAAGTGAGACGCCTC
ATTGCTAATGACTTTGTGAATGCTTTTAACTCTGGAGTAGATGTCTTGCTAACTCCCACCACCTTGAGTGAGGCAGTACC
ATACTTGGAGTTCATCAAAGAGGACAACAGAACACGAAGTGCCCAGGATGACATTTTTACACAAGCTGTAAATATGGCAG
GATTGCCAGCAGTGAATATCCCTATTGCGCTCTCAAACCAAGGGCTGCCAATAGGACTGCAGTTTATTGGACGTGCATTT
TGTGACCAACAGCTTCTTACAGTAGCCAAATGGTTTGAAAAACAAGTACAGTTTCCTGTTATTCAACTTCAAGAACTCGT
GGATAATTGTTCAGCAATCCTTGAAAATGAAAAATTAGCCTCTGTCTCTCTAAAACAGTAA
ATGCTGGGCCAGACGCTCCGAGAAGTTTCTGCGGCACTGAAACAAGGCCAAATTACACCAACAGAGCTCTGTCAAAAATG
TCTTTCTCTTATCAAGAAGACCAAGTTTCTGAATGCCTACATTACTGTATCAGAAGAGGTGGCCTTAAAACAAGCTGAAG
AATCAGAAAAGAGATATAAGAATGGACAGTCTCTTGGGGATTTAGATGGAATTCCTATTGCAGTAAAAGACAACTTTAGT
ACATCTGGCATTGAGACAACATGTGCATCAAATATGCTGAAAGGTTATGTACCACCTTATAATGCTACAGTAGTTCAGAA
GTTGTTGGATCAGGGAGCTCTACTAATGGGAAAAACAAATTTAGATGAATTTGCTATGGGATCTGGAAGCACAGATGGTG
TATTTGGACCAGTTAAAAACCCCTGGAGTTATTCAAAACAATATAGAGAAAAAAGGAAGCAGAATCCCCACAGCGAGAGT
GGAGATTCAGACTGGCTGATAACTGGAGGAAGCTCAGGTGGGAGTGCAGCTGCCGTGTCTGCGTTCACATGCTATGCGGC
TTTAGGATCGGATACAGGAGGATCCACCAGAAATCCTGCTGCCCACTGTGGGCTTGTTGGTTTCAAACCAAGCTATGGCT
TAGTTTCCCGTCATGGTCTCATTCCCCTGGTGAATTCGATGGATGTGCCAGGAATCTTAACCAGATATGTGGATGATGCA
GCAATTGTGTTGGGTGTACTGGCTGGACATGACCCCAAGGATTCTACCACAGTACCTATTAATAAACCACTTGTGCTTTC
CAGTTTGGAAGATGTGAGCAAACTATGTATAGGAATTCCAAAGGAATATCTTGTACCAGAATTATCAAGTGAAATACAGT
CTCTTTGGTCCAGAGCTGCTGACCTCTTTGAGTCTGAGGGGGCCAAAGTAATTGAAGTATCCCTTCCTCACACCAGTTAT
TCAATTGTCTGCTACCATGTGTTGTGTACATCAGAAGTGGCATCAAATATGGCAAGATTTGATGGGCTACAATATGGTCA
CAGATGTGACATTGATGTGTCCACTGAAGCCATGTATGCTGCAACCAGACGAGAGGGGTTCAATGATGTGGTGAGAGGAA
GAATTCTCTCAGGAAACTTTTTCTTATTAAAAGAAAACTATGAAAATTATTTCGTCAAAGCACAGAAAGTGAGACGCCTC
ATTGCTAATGACTTTGTGAATGCTTTTAACTCTGGAGTAGATGTCTTGCTAACTCCCACCACCTTGAGTGAGGCAGTACC
ATACTTGGAGTTCATCAAAGAGGACAACAGAACACGAAGTGCCCAGGATGACATTTTTACACAAGCTGTAAATATGGCAG
GATTGCCAGCAGTGAATATCCCTATTGCGCTCTCAAACCAAGGGCTGCCAATAGGACTGCAGTTTATTGGACGTGCATTT
TGTGACCAACAGCTTCTTACAGTAGCCAAATGGTTTGAAAAACAAGTACAGTTTCCTGTTATTCAACTTCAAGAACTCGT
GGATAATTGTTCAGCAATCCTTGAAAATGAAAAATTAGCCTCTGTCTCTCTAAAACAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 5 .13 RPM |
| SRP051959_skeletal_muscle | 37 .76 RPM |
| SRP051959_lymph_node | 4 .34 RPM |
| SRP051959_lung | 5 .58 RPM |
| SRP051959_liver | 7 .21 RPM |
| SRP051959_kidney | 12 .09 RPM |
| SRP051959_heart | 12 .56 RPM |
| SRP051959_colon | 6 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000017557 | ortholog_one2one | 3 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000001036 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000021670 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000130348 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008261 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000008330 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013383 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000016883 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000018462 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_692 | 79.31 | 54.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1421 | 83.84 | 99.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3781 | 83.68 | 99.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_3919 | 84.06 | 99.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006200 retrocopies