Parental gene: | METT5D1, ENSCJAG00000006142 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 11:91223208..91454831(+) |
>ENSCJAG00000006142
ATGCTTCGGTATCCATATTTTTGTAGAATGCATAAAGAATATCTTTCATGTTGGTTGGAATCTGGCATACCTAATTTAGC
TGTCTGGTCAAAAAGAATACATACTACAGCAGAAAAATGTAAAGAATATGAAGCCCATGAGCAAACATATCAAACTCAAG
CCCAGGAGTCACACAGATCTCAAGACAGAAATTTTGAAACTATGGTTAAATTACATATTCCAGTAATGGTGGATGAAGTT
GTTCATTGTTTGTCACCGCAAAAAGGACAGATTTTTCTAGATATGACATTTGGTTCGGGAGGACACACAAAAGCCATTCT
ACAGAAGGAGTCAGATATTGTTCTGTATGCCTTGGACAGAGACCCGACTGCTTATGCATTAGCTGAACATCTTTCAGAGT
TGTATCCTAAACAAATCCGAGCTATGCTGGGCCGATTCAGCCAGGCAGAAACCTTATTAATGAAAGCTGAAGTGCAGCCA
GGGACTTTTGATGGAGTTCTTATGGATCTTGGGTGTTCCTCCATGCAACTTGATACTTCTGAAAGAGGTTTTTCCCTTCG
GAAAGACGGCCCCTTGGACATGAGGATGGATGGTGACAGGTACCCTGACATGCCCACTGCTGCTGATGTTGTGAATGCTT
TAGATCAGCAGGCACTTGCATCTATCCTAAGAGCATACGGGGAGGAGAAGCATGCCAAGAAAATCGCTTCAGCAATTGTT
CAGGCACGCAGCATCTACCCCATTACCAGAACCCAGCAGCTTGCCAGCATCATTGCAGGTGCATTTCCTCCCTCTGCCAT
TTATGCACGAAAAGACTTGCTACAGCGATCTACTCATATTGCCACCAAGACTTTCCAGGCTCTTCGCATATTTGTAAACA
ATGAGCTCAATGAACTGCACACAGGACTCAAGACAGCTCAGAAGTTTCTGAGACCTGGTGGTCGTCTTGTTGCCCTTTCC
TTCCATTCACTAGAGGATCGCATCGTCAAAAGATTTTTGCTTGGAATAAGCATGACAGAAAGATTTAACCTAAGTGTTAG
ACAGCAAGTGATGAAAGCATCGCGGTTGGATTCAGATCACGAAAACGTGGAAGTCTCTATGAGAAGAGCTCCTTTAATGT
GGGAATTGATACACAAGAAGGTACTTAGTCCACAATCTCGGGATGTACAAGATAACCCCAGAGGGCGCTCAGCCAAGCTT
AGAGCAGCTATCAAATTATAA
ATGCTTCGGTATCCATATTTTTGTAGAATGCATAAAGAATATCTTTCATGTTGGTTGGAATCTGGCATACCTAATTTAGC
TGTCTGGTCAAAAAGAATACATACTACAGCAGAAAAATGTAAAGAATATGAAGCCCATGAGCAAACATATCAAACTCAAG
CCCAGGAGTCACACAGATCTCAAGACAGAAATTTTGAAACTATGGTTAAATTACATATTCCAGTAATGGTGGATGAAGTT
GTTCATTGTTTGTCACCGCAAAAAGGACAGATTTTTCTAGATATGACATTTGGTTCGGGAGGACACACAAAAGCCATTCT
ACAGAAGGAGTCAGATATTGTTCTGTATGCCTTGGACAGAGACCCGACTGCTTATGCATTAGCTGAACATCTTTCAGAGT
TGTATCCTAAACAAATCCGAGCTATGCTGGGCCGATTCAGCCAGGCAGAAACCTTATTAATGAAAGCTGAAGTGCAGCCA
GGGACTTTTGATGGAGTTCTTATGGATCTTGGGTGTTCCTCCATGCAACTTGATACTTCTGAAAGAGGTTTTTCCCTTCG
GAAAGACGGCCCCTTGGACATGAGGATGGATGGTGACAGGTACCCTGACATGCCCACTGCTGCTGATGTTGTGAATGCTT
TAGATCAGCAGGCACTTGCATCTATCCTAAGAGCATACGGGGAGGAGAAGCATGCCAAGAAAATCGCTTCAGCAATTGTT
CAGGCACGCAGCATCTACCCCATTACCAGAACCCAGCAGCTTGCCAGCATCATTGCAGGTGCATTTCCTCCCTCTGCCAT
TTATGCACGAAAAGACTTGCTACAGCGATCTACTCATATTGCCACCAAGACTTTCCAGGCTCTTCGCATATTTGTAAACA
ATGAGCTCAATGAACTGCACACAGGACTCAAGACAGCTCAGAAGTTTCTGAGACCTGGTGGTCGTCTTGTTGCCCTTTCC
TTCCATTCACTAGAGGATCGCATCGTCAAAAGATTTTTGCTTGGAATAAGCATGACAGAAAGATTTAACCTAAGTGTTAG
ACAGCAAGTGATGAAAGCATCGCGGTTGGATTCAGATCACGAAAACGTGGAAGTCTCTATGAGAAGAGCTCCTTTAATGT
GGGAATTGATACACAAGAAGGTACTTAGTCCACAATCTCGGGATGTACAAGATAACCCCAGAGGGCGCTCAGCCAAGCTT
AGAGCAGCTATCAAATTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 8 .91 RPM |
| SRP051959_skeletal_muscle | 2 .31 RPM |
| SRP051959_lymph_node | 7 .76 RPM |
| SRP051959_lung | 6 .93 RPM |
| SRP051959_liver | 11 .03 RPM |
| SRP051959_kidney | 7 .48 RPM |
| SRP051959_heart | 6 .38 RPM |
| SRP051959_colon | 4 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000169519 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000013616 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017865 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014291 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003399 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000003461 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3301 | 78.47 | 90.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_4047 | 80.98 | 84.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006142 retrocopies