Parental gene: | STK25, ENSCJAG00000006066 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:158047988..158061400(-) |
>ENSCJAG00000006066
ATGGCTCATCTCCGGGGATTTGCCAACCAGCACTCTCGAGTGGATCCGGAGGAGCTCTTCACCAAGCTCGACCGCATTGG
CAAGGGTTCGTTTGGGGAGGTCTACAAGGGCATCGATAACCACACCAAGGAGGTGGTGGCCATCAAGATCATCGACTTGG
AGGAGGCGGAGGATGAGATTGAGGACATCCAGCAGGAGATCACCGTGCTCAGCCAGTGCGACAGCCCCTACATCACCCGC
TACTTCGGCTCCTACCTGAAGAGCACCAAGCTGTGGATCATCATGGAGTACCTGGGTGGCGGCTCTGCGCTGGACTTGCT
GAAACCAGGCCCCCTGGAGGAGACGTACATTGCCACGATCCTGCGGGAGATTCTGAAGGGTCTGGATTATCTGCACTCTG
AGCGCAAGATCCACCGAGACATTAAAGCTGCCAACGTGCTGCTCTCAGAGCAGGGGGATGTGAAGCTGGCAGACTTTGGG
GTGGCCGGGCAGCTCACAGACACGCAGATCAAGAGGAACACGTTTGTGGGCACCCCCTTCTGGATGGCGCCTGAGGTCAT
CAAGCAGTCCGCCTACGACTTCAAGGCCGACATCTGGTCCCTGGGGATCACGGCCATTGAGCTGGCCAAGGGGGAGCCTC
CAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCACCCTGGAGGGCCAGCACAGC
AAGCCCTTCAAGGAGTTCGTGGAGGCCTGCCTCAACAAGGACCCCCGATTCCGGCCCACGGCCAAGGAGCTCCTGAAGCA
CAAGTTCATCACACGCTACACCAAGAAGACCTCCTTCCTCACGGAGCTCATCGACCGCTACAAGCGCTGGAAGTCTGAGG
GGCATGGCGAAGAGTCCAGCTCTGAGGACTCGGACCTTGATGGCGAGGCGGAGGACGGGGAGCAGGGCCCGATCTGGACA
TTCCCCCCCACCATCCGGCCAAGTCCACACAGCAAGCTTCACAAGGGGACGGCCCTGCACGGCTCACAGAAGCCCGTGGA
GCCCGTCAAGAGGCAGCCAAGGTCCCAGTGCCTGTCCACGCTGGTCAGGCCCGTCTTCGGAGAGCTCAAAGAGAAGCACA
AGCAGAGCGGCGGGAGCGTGGGC
ATGGCTCATCTCCGGGGATTTGCCAACCAGCACTCTCGAGTGGATCCGGAGGAGCTCTTCACCAAGCTCGACCGCATTGG
CAAGGGTTCGTTTGGGGAGGTCTACAAGGGCATCGATAACCACACCAAGGAGGTGGTGGCCATCAAGATCATCGACTTGG
AGGAGGCGGAGGATGAGATTGAGGACATCCAGCAGGAGATCACCGTGCTCAGCCAGTGCGACAGCCCCTACATCACCCGC
TACTTCGGCTCCTACCTGAAGAGCACCAAGCTGTGGATCATCATGGAGTACCTGGGTGGCGGCTCTGCGCTGGACTTGCT
GAAACCAGGCCCCCTGGAGGAGACGTACATTGCCACGATCCTGCGGGAGATTCTGAAGGGTCTGGATTATCTGCACTCTG
AGCGCAAGATCCACCGAGACATTAAAGCTGCCAACGTGCTGCTCTCAGAGCAGGGGGATGTGAAGCTGGCAGACTTTGGG
GTGGCCGGGCAGCTCACAGACACGCAGATCAAGAGGAACACGTTTGTGGGCACCCCCTTCTGGATGGCGCCTGAGGTCAT
CAAGCAGTCCGCCTACGACTTCAAGGCCGACATCTGGTCCCTGGGGATCACGGCCATTGAGCTGGCCAAGGGGGAGCCTC
CAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCACCCTGGAGGGCCAGCACAGC
AAGCCCTTCAAGGAGTTCGTGGAGGCCTGCCTCAACAAGGACCCCCGATTCCGGCCCACGGCCAAGGAGCTCCTGAAGCA
CAAGTTCATCACACGCTACACCAAGAAGACCTCCTTCCTCACGGAGCTCATCGACCGCTACAAGCGCTGGAAGTCTGAGG
GGCATGGCGAAGAGTCCAGCTCTGAGGACTCGGACCTTGATGGCGAGGCGGAGGACGGGGAGCAGGGCCCGATCTGGACA
TTCCCCCCCACCATCCGGCCAAGTCCACACAGCAAGCTTCACAAGGGGACGGCCCTGCACGGCTCACAGAAGCCCGTGGA
GCCCGTCAAGAGGCAGCCAAGGTCCCAGTGCCTGTCCACGCTGGTCAGGCCCGTCTTCGGAGAGCTCAAAGAGAAGCACA
AGCAGAGCGGCGGGAGCGTGGGC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 19 .81 RPM |
| SRP051959_skeletal_muscle | 23 .89 RPM |
| SRP051959_lymph_node | 21 .16 RPM |
| SRP051959_lung | 20 .29 RPM |
| SRP051959_liver | 16 .87 RPM |
| SRP051959_kidney | 21 .50 RPM |
| SRP051959_heart | 20 .26 RPM |
| SRP051959_colon | 13 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004508 | within_species_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004267 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025879 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1090 | 88.28 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006066 retrocopies