Parental gene: | ENSCJAG00000005391 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:58893430..58913447(-) |
>ENSCJAG00000005391
ATGAGCCGGCTGCCGAATGACTACGACCCCTACGCGATTGAAGAGCCTAGTGACGAGGAGCCGGCTTTGAGCAGCTCTGA
AGATGAAGTGGATGTGCTTTTACATGGAACTCCTGACCAAAAACGAAAACTCATCAGAGAATGTCTTACTGGAGAAAGTG
AATCATCTAGTGAAGATGAATTTGAAAAGGAAATGGAAGCTGAATTAAATTCTACCATGAAAACAATGGAGGACAAGTTA
TCCTCTCTGGGAACTGGATCTTCCTCAGGAAATGGAAAAGTTGCAACAGCTCCAGCAAGATACTATGATGATATATATTT
TGATTCTGATTCTGAGGATGAAGACAAAGCAGTACAGGTGACCAAGAAAAAAAAGAAGAAACAACACAAGATTCCAACAA
ATGATGAATTACTATATGATCCTGAAAAAGATAACAGAGATCAGGCCTGGGTTGATGCACAGAGAAGGGGTTACCATGGT
TTGGGACGACAGAGGTCACATCAACAACAGCCTGTTCCAAATAGTGACGCTGTCTTGAATTGTCCTGCCTGCATGACCAC
ACTGTGCCTTGATTGCCAAAGGCATGAATCGTACAAAACTCAATATAGAGCGATGTTCGTGATGAACTGTTCTATTAACA
AAGAGGAGGTTCTAAGATATAAAGCCTCAGAGAACAGGAAGAAAAGGCGGGGCCATAAGAAGATGAGGTCTAACCAGGAA
GATGCTGCCGAGAAGGCAGAGACAGATGTGGAAGAAATCTATTACCCAGTTATGTGCACCGAATGTTCCACTGAAGTGGC
AGTCTATGACAAGGATGAAGTCTTTCATTTTTTCAATGTTTTAGCAAGCCATTCCTAA
ATGAGCCGGCTGCCGAATGACTACGACCCCTACGCGATTGAAGAGCCTAGTGACGAGGAGCCGGCTTTGAGCAGCTCTGA
AGATGAAGTGGATGTGCTTTTACATGGAACTCCTGACCAAAAACGAAAACTCATCAGAGAATGTCTTACTGGAGAAAGTG
AATCATCTAGTGAAGATGAATTTGAAAAGGAAATGGAAGCTGAATTAAATTCTACCATGAAAACAATGGAGGACAAGTTA
TCCTCTCTGGGAACTGGATCTTCCTCAGGAAATGGAAAAGTTGCAACAGCTCCAGCAAGATACTATGATGATATATATTT
TGATTCTGATTCTGAGGATGAAGACAAAGCAGTACAGGTGACCAAGAAAAAAAAGAAGAAACAACACAAGATTCCAACAA
ATGATGAATTACTATATGATCCTGAAAAAGATAACAGAGATCAGGCCTGGGTTGATGCACAGAGAAGGGGTTACCATGGT
TTGGGACGACAGAGGTCACATCAACAACAGCCTGTTCCAAATAGTGACGCTGTCTTGAATTGTCCTGCCTGCATGACCAC
ACTGTGCCTTGATTGCCAAAGGCATGAATCGTACAAAACTCAATATAGAGCGATGTTCGTGATGAACTGTTCTATTAACA
AAGAGGAGGTTCTAAGATATAAAGCCTCAGAGAACAGGAAGAAAAGGCGGGGCCATAAGAAGATGAGGTCTAACCAGGAA
GATGCTGCCGAGAAGGCAGAGACAGATGTGGAAGAAATCTATTACCCAGTTATGTGCACCGAATGTTCCACTGAAGTGGC
AGTCTATGACAAGGATGAAGTCTTTCATTTTTTCAATGTTTTAGCAAGCCATTCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 13 .89 RPM |
| SRP051959_skeletal_muscle | 8 .74 RPM |
| SRP051959_lymph_node | 14 .27 RPM |
| SRP051959_lung | 12 .64 RPM |
| SRP051959_liver | 14 .17 RPM |
| SRP051959_kidney | 13 .91 RPM |
| SRP051959_heart | 9 .17 RPM |
| SRP051959_colon | 10 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000003005 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000013814 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014525 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001029 | ortholog_many2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003226 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000005273 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000001306 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3231 | 86.13 | 59.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005391 retrocopies