Parental gene:

SSBP3, ENSCJAG00000005029

Aliases:None
Description:single stranded DNA binding protein 3 [Source:HGNC Symbol;Acc:15674]
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:89507560..89685287(-)


>ENSCJAG00000005029
ATGTTTGCCAAAGGCAAAGGCTCGGCGGTGCCCTCGGACGGGCAGGCTCGGGAAAAGTTAGCTTTATACGTCTACGAATA
TTTACTGCACGTAGGAGCACAGAAATCTGCACAGACCTTCTTATCGGAGATTCGATGGGAAAAAAACATCACATTGGGAG
AACCGCCTGGGTTTTTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTCCTGAAAGGAGAGACACTTGT
GAACATTCAAGTGAAGCAAAAGCCTTTCATGATTATAGTGCAGCAGCTGCCCCAAGCCCCGTGCTTGGCAACATTCCCCC
CAATGATGGGATGCCGGGAGGCCCCATCCCGCCAGGTTTCTTTCAGGGTCCTCCGGGGTCACAGCCCTCGCCGCACGCAC
AGCCTCCACCTCACAATCCTAGCAGCATGATGGGACCCCACAGTCAGCCTTTTATGTCACCGCGATACGCAGGCGGCCCC
AGGCCCCCGATCAGAATGGGAAACCAGCCTCCGGGAGGAGTTCCTGGGACACAGCCATTGCTGCCCAATTCCATGGATCC
CACACGACAACAAGCCCACCCCAACATGGGAGGATCAATGCAGAGAATGAACCCTCCCCGAGGCATGGGGCCCATGGGTC
CTGGCCCACAGAATTACGGCAGCGGCATGAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCCGGGATTAACATGGGC
CCGGGAGCTGGCAGACCCTGGCCCAATCCTAACAGTGCTAACTCGATTCCATACTCCTCCTCATCACCCGGTACCTATGT
GGGACCCCCTGGTGGTGGTGGCCCTCCAGGAACACCCATTATGCCCAGTCCTGCAGATTCAACAAATTCCAGTGACAACA
TCTACACAATGATTAATCCGGTGCCGCCTGGAGGCAGCCGGTCCAACTTCCCAATGGGTCCCGGCTCGGACGGTCCAATG
GGCGGCATGGGCGGCATGGAGCCACACCACATGAACGGATCGTTAGGGTCAGGCGACATAGATGGACTTCCAAAAAATTC
TCCTAACAACATAAGTGGCATTAGCAATCCTCCAGGCACCCCTCGAGATGATGGCGAGCTAGGAGGGAACTTCCTTCACT
CCTTTCAGAACGACAATTATTCTCCAAGCATGACGATGAGTGTGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 7 .37 RPM
SRP051959_skeletal_muscle 4 .39 RPM
SRP051959_lymph_node 5 .62 RPM
SRP051959_lung 7 .95 RPM
SRP051959_liver 3 .55 RPM
SRP051959_kidney 8 .32 RPM
SRP051959_heart 11 .00 RPM
SRP051959_colon 7 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000157216 ortholog_one2one 6 retrogenes
retro_hsap_1302, retro_hsap_1384, retro_hsap_2155, retro_hsap_2319, retro_hsap_2539, retro_hsap_3721,
Macropus eugenii ENSMEUG00000009291 ortholog_one2one 1 retrogene
retro_meug_1372,
Oryctolagus cuniculus ENSOCUG00000005903 ortholog_one2one 1 retrogene
retro_ocun_252,
Pan troglodytes ENSPTRG00000000770 ortholog_one2one 2 retrogenes
retro_ptro_2618, retro_ptro_2931,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3827 84.64 67.78
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Download FASTA sequences of all ENSCJAG00000005029 retrocopies