Parental gene: | IFRD2, ENSCJAG00000004993 |
| Aliases: | None |
| Description: | interferon-related developmental regulator 2 [Source:HGNC Symbol;Acc:5457] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 15:26007265..26012125(-) |
>ENSCJAG00000004993
TCCCGTAGTGCTCTACGCGCAGCTCAGGCCCCTGGGATTAGTAGTTTTAGCCGCGTAGATGGCGGGCCGCCTCGGGAAGA
TGGTGGCGCGCGCGGCGTGTGGCTCCTGTCGTCTGGCCAAGTCTCAGCGCAGTGCACCGGCCGGCTTATCGCTGGCCTGG
AGCCCACACCCACCGGGTCCCTGACCCCGCGCCCCCTGCGCCCCCCGCGCCCCCCGCGCCCGGTTCCCAGCATGCCTCGC
TCCCGTAAGGGCAACACGCTCCGAAAGGGTGGTCAGCGCCGTGGAGGAGGTGCCCAGAGCAGTGCCCAAGCTGACTCAGG
TTCCAGTGAGGATGAGGCAGCCAGTGAGGCCCACAGCACCGCCAGTGAATGCCCCAGCCTTCTCAGCACCACTGCAGAGG
ACAGCCTTGGGGGGGATGTCGTGGATGAGCAGAGCCAGCAAGAAGACCTTGAGGAAAAGCTGAAGGAGTATGTGGACTGC
CTCACAGACAAGAGTGCCAAGACCCGGCAGGGTGCTCTTGAGAGCCTGCGCCTGGCCCTGGCGTCCCGCCTACTCCCCGA
CTTCTTGCTGGAGCGCCGCCTCACACTAGCCGATGCCCTGGAAAAGTGCCTCAAGAAAGGGAAGGGTGAGGAACAGGCCC
TGGCGGCTGCTGTGCTAGGCCTGCTCTGCGTGCAGCTGGGCCCTGGACCCAAGGGTGAGGAGCTGTTCCACAGCCTACAG
CCCCTGCTGGTCTCTGTGCTCAGTGACAGCACAGCTAGCCCTGCTGCCCAGCTCCACTGCGCTTCTGCTCTTGGCCTGGG
CTGCTACGTGGCTGCCGCCGACATCCAGGACCTGGTCTCTTGCCTTGCCTGCTTAGAAAGTATTTTCAGCCAGTTCTATG
GCTTGGGCAGCTCTGCAACTCCTGTGGTCCCTGCCAGCCTGCACGGCCTACTCTGTGCTGCCCTGCAGGCCTGGGCATTA
CTGCTCACCATCTGCCCCAGCACCCACTTCAGCCACATCCTTGACAGGCAGCTGCCCCGGCTGCCCCAGCTCTTGTCCAG
TGAAAGTGTGAACCTGCGGATTGCTGCTGGTGAAACCATTGCCCTGCTCTTTGAGCTTGCCCGGGACCTTGAGGAGGAGT
TTGTTTACAAGGACATGGAGGCCCTCTGCAGTGTCCTGCGCACTCTGGCCACTGACAGCAACAAGTACCGTGCCAAGGCC
GATCGCCGGCGCCAGCGCTCTACTTTCCGCGCCGTGCTGCACTCCGTGGAGGGCGGTGAATGCGAAGAAGAGACAGTGCG
CTTTGGCTTTGAGGTGCTCTACATGGACAGCTGGGCTCGGCACCGAATCTATGCTGCTTTCAAGGAAGTGCTGGGTTCGG
GCATGCACCACCACCTCCAGAACAATGAGCTACTCCGTGACATCTTTGGGCTGGGCCCTGTGCTGGTGCTGGATGCTGCT
GCCCTGAAGGCCTGCAAGGTTCCACGCTTCGAGAAGCACCTGTACAATGCTGCCACCTTCAAAGCCCGGACGAAGGCTCG
AAGCCGTGTGCGGGACAAGCGGGCAGACATCCTGTGA
TCCCGTAGTGCTCTACGCGCAGCTCAGGCCCCTGGGATTAGTAGTTTTAGCCGCGTAGATGGCGGGCCGCCTCGGGAAGA
TGGTGGCGCGCGCGGCGTGTGGCTCCTGTCGTCTGGCCAAGTCTCAGCGCAGTGCACCGGCCGGCTTATCGCTGGCCTGG
AGCCCACACCCACCGGGTCCCTGACCCCGCGCCCCCTGCGCCCCCCGCGCCCCCCGCGCCCGGTTCCCAGCATGCCTCGC
TCCCGTAAGGGCAACACGCTCCGAAAGGGTGGTCAGCGCCGTGGAGGAGGTGCCCAGAGCAGTGCCCAAGCTGACTCAGG
TTCCAGTGAGGATGAGGCAGCCAGTGAGGCCCACAGCACCGCCAGTGAATGCCCCAGCCTTCTCAGCACCACTGCAGAGG
ACAGCCTTGGGGGGGATGTCGTGGATGAGCAGAGCCAGCAAGAAGACCTTGAGGAAAAGCTGAAGGAGTATGTGGACTGC
CTCACAGACAAGAGTGCCAAGACCCGGCAGGGTGCTCTTGAGAGCCTGCGCCTGGCCCTGGCGTCCCGCCTACTCCCCGA
CTTCTTGCTGGAGCGCCGCCTCACACTAGCCGATGCCCTGGAAAAGTGCCTCAAGAAAGGGAAGGGTGAGGAACAGGCCC
TGGCGGCTGCTGTGCTAGGCCTGCTCTGCGTGCAGCTGGGCCCTGGACCCAAGGGTGAGGAGCTGTTCCACAGCCTACAG
CCCCTGCTGGTCTCTGTGCTCAGTGACAGCACAGCTAGCCCTGCTGCCCAGCTCCACTGCGCTTCTGCTCTTGGCCTGGG
CTGCTACGTGGCTGCCGCCGACATCCAGGACCTGGTCTCTTGCCTTGCCTGCTTAGAAAGTATTTTCAGCCAGTTCTATG
GCTTGGGCAGCTCTGCAACTCCTGTGGTCCCTGCCAGCCTGCACGGCCTACTCTGTGCTGCCCTGCAGGCCTGGGCATTA
CTGCTCACCATCTGCCCCAGCACCCACTTCAGCCACATCCTTGACAGGCAGCTGCCCCGGCTGCCCCAGCTCTTGTCCAG
TGAAAGTGTGAACCTGCGGATTGCTGCTGGTGAAACCATTGCCCTGCTCTTTGAGCTTGCCCGGGACCTTGAGGAGGAGT
TTGTTTACAAGGACATGGAGGCCCTCTGCAGTGTCCTGCGCACTCTGGCCACTGACAGCAACAAGTACCGTGCCAAGGCC
GATCGCCGGCGCCAGCGCTCTACTTTCCGCGCCGTGCTGCACTCCGTGGAGGGCGGTGAATGCGAAGAAGAGACAGTGCG
CTTTGGCTTTGAGGTGCTCTACATGGACAGCTGGGCTCGGCACCGAATCTATGCTGCTTTCAAGGAAGTGCTGGGTTCGG
GCATGCACCACCACCTCCAGAACAATGAGCTACTCCGTGACATCTTTGGGCTGGGCCCTGTGCTGGTGCTGGATGCTGCT
GCCCTGAAGGCCTGCAAGGTTCCACGCTTCGAGAAGCACCTGTACAATGCTGCCACCTTCAAAGCCCGGACGAAGGCTCG
AAGCCGTGTGCGGGACAAGCGGGCAGACATCCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .29 RPM |
| SRP051959_skeletal_muscle | 9 .72 RPM |
| SRP051959_lymph_node | 4 .31 RPM |
| SRP051959_lung | 3 .90 RPM |
| SRP051959_liver | 8 .79 RPM |
| SRP051959_kidney | 3 .26 RPM |
| SRP051959_heart | 4 .98 RPM |
| SRP051959_colon | 3 .90 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000020119 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012534 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000024363 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4213 | 92.06 | 73.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004993 retrocopies