Parental gene: | BAT1, ENSCJAG00000003152 |
| Aliases: | DDX39B, BAT1 |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:32058586..32071648(-) |
>ENSCJAG00000003152
ATGGCAGAGAACGATGTAGACAATGAGCTCTTGGACTATGAAGATGATGAGGTGGAGACAGCAGCTGGGGGAGATGGGGC
TGAGGCCCCTGCCAAGAAGGATGTCAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTTTCGTGACTTCCTGCTCAAGC
CAGAGTTGCTCCGGGCCATTGTCGACTGTGGCTTTGAGCATCCATCAGAAGTCCAGCATGAGTGCATCCCTCAGGCCATT
CTGGGAATGGATGTCCTGTGCCAGGCCAAGTCGGGCATGGGAAAGACAGCAGTGTTTGTCTTGGCCACACTGCAACAGCT
GGAGCCAGTTACTGGGCAGGTGTCTGTGCTGGTGATGTGTCACACTCGGGAGTTGGCTTTTCAGATCAGCAAGGAATATG
AGCGCTTTTCTAAATATATGCCCAATGTCAAGGTTGCTGTGTTTTTTGGTGGTCTGTCTATCAAGAAGGATGAAGAGGTG
CTGAAGAAGAACTGCCCGCATATCGTCGTGGGGACTCCAGGCCGTATCCTAGCCCTGGCTCGAAATAAGAGCCTCAACCT
CAAACACATTAAACACTTTATTTTGGATGAATGCGATAAAATGCTTGAACAGCTCGACATGCGTCGGGATGTCCAGGAAA
TTTTTCGCATGACCCCCCATGAGAAGCAGGTCATGATGTTCAGTGCTACCTTGAGCAAAGAGATCCGTCCAGTCTGCCGC
AAGTTCATGCAAGATCCAATGGAGATCTTCGTGGATGATGAGACGAAGTTGACGCTGCATGGATTGCAGCAGTACTACGT
GAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGATCTTCTGGATGTCCTTGAGTTCAACCAGGTGGTGATCTTTG
TGAAGTCTGTGCAGCGGTGCATTGCCTTGGCCCAGCTACTGGTGGAGCAGAACTTCCCAGCCATTGCCATCCACCGTGGG
ATGCCCCAGGAGGAGAGGCTTTCTCGGTATCAGCAGTTTAAAGATTTTCAACGACGAATTCTTGTGGCTACCAACCTATT
TGGCCGAGGCATGGACATCGAGCGGGTGAACATTGCTTTTAATTATGACATGCCTGAGGATTCTGACACCTACCTGCATC
GGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTGGCGATCACATTTGTGTCTGATGAGAATGATGCCAAGATCCTC
AATGATGTGCAGGATCGCTTTGAGGTCAATATTAGTGAGCTGCCTGATGAGATAGACATCTCCTCCTCAGTTGAACAGAC
ACGGTAG
ATGGCAGAGAACGATGTAGACAATGAGCTCTTGGACTATGAAGATGATGAGGTGGAGACAGCAGCTGGGGGAGATGGGGC
TGAGGCCCCTGCCAAGAAGGATGTCAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTTTCGTGACTTCCTGCTCAAGC
CAGAGTTGCTCCGGGCCATTGTCGACTGTGGCTTTGAGCATCCATCAGAAGTCCAGCATGAGTGCATCCCTCAGGCCATT
CTGGGAATGGATGTCCTGTGCCAGGCCAAGTCGGGCATGGGAAAGACAGCAGTGTTTGTCTTGGCCACACTGCAACAGCT
GGAGCCAGTTACTGGGCAGGTGTCTGTGCTGGTGATGTGTCACACTCGGGAGTTGGCTTTTCAGATCAGCAAGGAATATG
AGCGCTTTTCTAAATATATGCCCAATGTCAAGGTTGCTGTGTTTTTTGGTGGTCTGTCTATCAAGAAGGATGAAGAGGTG
CTGAAGAAGAACTGCCCGCATATCGTCGTGGGGACTCCAGGCCGTATCCTAGCCCTGGCTCGAAATAAGAGCCTCAACCT
CAAACACATTAAACACTTTATTTTGGATGAATGCGATAAAATGCTTGAACAGCTCGACATGCGTCGGGATGTCCAGGAAA
TTTTTCGCATGACCCCCCATGAGAAGCAGGTCATGATGTTCAGTGCTACCTTGAGCAAAGAGATCCGTCCAGTCTGCCGC
AAGTTCATGCAAGATCCAATGGAGATCTTCGTGGATGATGAGACGAAGTTGACGCTGCATGGATTGCAGCAGTACTACGT
GAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGATCTTCTGGATGTCCTTGAGTTCAACCAGGTGGTGATCTTTG
TGAAGTCTGTGCAGCGGTGCATTGCCTTGGCCCAGCTACTGGTGGAGCAGAACTTCCCAGCCATTGCCATCCACCGTGGG
ATGCCCCAGGAGGAGAGGCTTTCTCGGTATCAGCAGTTTAAAGATTTTCAACGACGAATTCTTGTGGCTACCAACCTATT
TGGCCGAGGCATGGACATCGAGCGGGTGAACATTGCTTTTAATTATGACATGCCTGAGGATTCTGACACCTACCTGCATC
GGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTGGCGATCACATTTGTGTCTGATGAGAATGATGCCAAGATCCTC
AATGATGTGCAGGATCGCTTTGAGGTCAATATTAGTGAGCTGCCTGATGAGATAGACATCTCCTCCTCAGTTGAACAGAC
ACGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 56 .05 RPM |
| SRP051959_skeletal_muscle | 57 .28 RPM |
| SRP051959_lymph_node | 64 .20 RPM |
| SRP051959_lung | 55 .28 RPM |
| SRP051959_liver | 35 .59 RPM |
| SRP051959_kidney | 51 .09 RPM |
| SRP051959_heart | 45 .43 RPM |
| SRP051959_colon | 43 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000008264 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000008839 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016433 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1461 | 70.48 | 76.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000003152 retrocopies