Parental gene: | GSTM1, ENSCJAG00000003123 |
| Aliases: | None |
| Description: | glutathione S-transferase mu 1 [Source:HGNC Symbol;Acc:4632] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:145559073..145589409(+) |
>ENSCJAG00000003123
ATGCCCATGACACTGGGGTACTGGGACCTCCGCGGGTTGGCCCACGCCATCCGCCTGCTCCTGGAATACACAGACTCAAG
CTACGAGGAAAAGAAGTACACGATGGGGGACGCTCCTGACTATGACAGAAGCCAGTGGCTGAAGGAAAAATTCAAGTTGG
GCCTGGACTTTCCCAATGGGATGCTGGGGAGGCTGCTGGCCCAACTGAGCTTCCCTGGTTTCCCCTCCATCCAGCTGCCT
TACTTGATTGATGGGGCTCACAAGATCACCCAGAGCAACGCCATCCTGCGCTACATTGCCCGCAAACACAGCCTGTGTGG
GGAGACAGAAGAGGAGAAGATTCGTGTGGACATTTTGGAGAACCAGACCATGGACACTCGGATGCAGCTGGCCATGCTCT
GCTACAACCCAGAATTTGAGAAACTGAAGCCAAAGTACTTGGAGGAACTCCCTGAAAAGTTAAAGCTCTACTCCCAGTTT
CTGGGGAAGCGACCATGGTTTGCAGGAGACAAGATAACCTTTGTGGATTTCCTCGCCTATGACGTTCTTGACCAGAACCG
TATATTTGAGCCCAGCTGCCTGGACGCTTTCCCAAACCTGAAGGACTTCATGTCCCGATTCGAGGGCTTGGAGAAGATCT
CTGCCTACATGAAGTCCAGCCGCTTCCTCCCAAGACCTGTGTTCACGAAGATGGCTGTCTGGGGCAACAAGTAG
ATGCCCATGACACTGGGGTACTGGGACCTCCGCGGGTTGGCCCACGCCATCCGCCTGCTCCTGGAATACACAGACTCAAG
CTACGAGGAAAAGAAGTACACGATGGGGGACGCTCCTGACTATGACAGAAGCCAGTGGCTGAAGGAAAAATTCAAGTTGG
GCCTGGACTTTCCCAATGGGATGCTGGGGAGGCTGCTGGCCCAACTGAGCTTCCCTGGTTTCCCCTCCATCCAGCTGCCT
TACTTGATTGATGGGGCTCACAAGATCACCCAGAGCAACGCCATCCTGCGCTACATTGCCCGCAAACACAGCCTGTGTGG
GGAGACAGAAGAGGAGAAGATTCGTGTGGACATTTTGGAGAACCAGACCATGGACACTCGGATGCAGCTGGCCATGCTCT
GCTACAACCCAGAATTTGAGAAACTGAAGCCAAAGTACTTGGAGGAACTCCCTGAAAAGTTAAAGCTCTACTCCCAGTTT
CTGGGGAAGCGACCATGGTTTGCAGGAGACAAGATAACCTTTGTGGATTTCCTCGCCTATGACGTTCTTGACCAGAACCG
TATATTTGAGCCCAGCTGCCTGGACGCTTTCCCAAACCTGAAGGACTTCATGTCCCGATTCGAGGGCTTGGAGAAGATCT
CTGCCTACATGAAGTCCAGCCGCTTCCTCCCAAGACCTGTGTTCACGAAGATGGCTGTCTGGGGCAACAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 22 .65 RPM |
| SRP051959_skeletal_muscle | 8 .84 RPM |
| SRP051959_lymph_node | 13 .36 RPM |
| SRP051959_lung | 19 .57 RPM |
| SRP051959_liver | 15 .47 RPM |
| SRP051959_kidney | 30 .02 RPM |
| SRP051959_heart | 18 .65 RPM |
| SRP051959_colon | 24 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000000879 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003168 | within_species_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005148 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003194 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001064 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000001061 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_811 | 80.12 | 74.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1299 | 97.25 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_2226 | 81.21 | 75.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_2463 | 72.15 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_2498 | 95.91 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cjac_3004 | 83.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_cjac_3084 | 96.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000003123 retrocopies