Parental gene: | SPDYC, ENSCJAG00000002403 |
| Aliases: | None |
| Description: | speedy/RINGO cell cycle regulator family member C [Source:HGNC Symbol;Acc:32681] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 11:120808037..120811471(+) |
>ENSCJAG00000002403
ATGCTGTGGGCAATTCCTGAGGCCGGGTCACCCTGCTCCATCTCCATCTCCTATGAGATGGATGACTCCCAAGACCCCAC
CACTTCCGCTGTAGTTATGACCCAGGTAGAGCTGGAGGGCTGCAGCCAGCAAGGTGGGGGCAATGGGTTCCTCAGTTTTC
GCCAGCACGAAGAGCTCCAGGCCTTCCTCAACCTTCTGGAGGACAGTTTTGTCCAGGAATTCCTCTCCAAAGACCCCTGC
TTCCGGATTTCAGATAAGTATCTCCTGGCCATGGTGCTGGTCTACTTCCAGCGCGCCCGCCTGAAGCTCAGCGAGTACAC
CCACAGCAGCCTGTTCTTGGCCCTGTACCTTGCAAATGACATGGAGGAGGACCTGGAGGGGCCCAAATGTCAGATTTTTC
CATGGGCCCTGGGAAGAGATTGGTGTTTACGAGTGGGGAAGTTCCTACAGCAGAGGGATAAGCTCTGGGCACGGATGGGT
TTCCGGGCTGTCGTGAGCCGCCAGTGCTGTGAGGAGGTCATGGCAAAGGAGCCATTTCACTGGGCTTGGACTCGGGACCG
GCGCCCCCACCATGGCGGGGTTCAGAGGGTCTGTCCACAGGTCCCTTTCCGCCTTCCCCGGGGCCCTGGCCTCTCACCAC
CCCACTGTTCCCCCTGTGGCTTGCCCCAGCACCCCGGCTGCCACCCACTTAAGCCTGTGTCACTCAAGTGCTCTTCTCTG
ACCTCGGAGTGTCATCGCCTTCCCTCCCAAAATTCACTCTCAGCGTTCAAAAACACCTGGGGTGGGGACTTTCTCCTCAT
CTTACCTCCCCAGATTCAACTGGAACCTGACACCTACTGCCTCCGAATTTTCCCAAAGCTTCTGCCACGCCCTGGGCACT
GA
ATGCTGTGGGCAATTCCTGAGGCCGGGTCACCCTGCTCCATCTCCATCTCCTATGAGATGGATGACTCCCAAGACCCCAC
CACTTCCGCTGTAGTTATGACCCAGGTAGAGCTGGAGGGCTGCAGCCAGCAAGGTGGGGGCAATGGGTTCCTCAGTTTTC
GCCAGCACGAAGAGCTCCAGGCCTTCCTCAACCTTCTGGAGGACAGTTTTGTCCAGGAATTCCTCTCCAAAGACCCCTGC
TTCCGGATTTCAGATAAGTATCTCCTGGCCATGGTGCTGGTCTACTTCCAGCGCGCCCGCCTGAAGCTCAGCGAGTACAC
CCACAGCAGCCTGTTCTTGGCCCTGTACCTTGCAAATGACATGGAGGAGGACCTGGAGGGGCCCAAATGTCAGATTTTTC
CATGGGCCCTGGGAAGAGATTGGTGTTTACGAGTGGGGAAGTTCCTACAGCAGAGGGATAAGCTCTGGGCACGGATGGGT
TTCCGGGCTGTCGTGAGCCGCCAGTGCTGTGAGGAGGTCATGGCAAAGGAGCCATTTCACTGGGCTTGGACTCGGGACCG
GCGCCCCCACCATGGCGGGGTTCAGAGGGTCTGTCCACAGGTCCCTTTCCGCCTTCCCCGGGGCCCTGGCCTCTCACCAC
CCCACTGTTCCCCCTGTGGCTTGCCCCAGCACCCCGGCTGCCACCCACTTAAGCCTGTGTCACTCAAGTGCTCTTCTCTG
ACCTCGGAGTGTCATCGCCTTCCCTCCCAAAATTCACTCTCAGCGTTCAAAAACACCTGGGGTGGGGACTTTCTCCTCAT
CTTACCTCCCCAGATTCAACTGGAACCTGACACCTACTGCCTCCGAATTTTCCCAAAGCTTCTGCCACGCCCTGGGCACT
GA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .71 RPM |
| SRP051959_skeletal_muscle | 0 .37 RPM |
| SRP051959_lymph_node | 0 .66 RPM |
| SRP051959_lung | 0 .98 RPM |
| SRP051959_liver | 0 .61 RPM |
| SRP051959_kidney | 0 .40 RPM |
| SRP051959_heart | 0 .61 RPM |
| SRP051959_colon | 0 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000010068 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015020 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1136 | 85.82 | 94.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1851 | 74.74 | 64.16 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000002403 retrocopies