Parental gene:

LRRC2, ENSCJAG00000002149

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:15:22189561..22252795(-)


>ENSCJAG00000002149
ATGGGACATAAAGTGGTTGTCTTCGACATTTCTGTCCTCAGAGCCTTGTGGGAAACTCGCGTCAAGAAGCACAAGGCTTG
GCAGAAGAAGGAGGCGGAAAGGCTTGAGAAGAGCGCCTTGGAGAAGATAAAGGAGGAGTGGAACTTTGTGGCCGAATGCA
GGAGGAAGGGCATCCCCCAAGCTGTGTACTGCAAGAATGGCTTCATAGACACCAACGTGCGGCTGCTGGACAAGATCGAA
AGGAACGCTCTCACAAGGCAGAGTTCGCTTCCCAAGGACAGAGGCAAACGGAGCAGCGCGTTCGTGTTTGAACTTTCTGG
GGAGCACTGGACGGAGCTCCCAGATTCATTGAAGGAGCAGACACACCTGAGAGAATGGCACATAAGCAATACCCTGATTC
AAATCATTCCTACATATATTGAGCTGTTTCAAGCCATGAGAATTCTGGATCTGCCAAGAAACCAAATCTCACATCTTCCA
GCAGAAATTGGTTGTTTGAAGAACCTGAAAGAACTCAATGTCAGTTTTAACCATCTGAAGAGCATTCCTCCAGAATTGGG
AGACTGTGAAAATCTAGACAGACTGGATTGTTCTGGAAATCTAGAGTTAACAGAGCTGCCCTTTGAATTAAGTAATTTGA
AGCAAGTTACATTTGTAGATATCTCAGCAAACAAGTTTTCCAGCGTCCCGATCTGTGTCCTGCGGATGTCTAATTTGCAG
TGGTTGGATATCAGCAACAATAACCTGACTGACCTGCCGCAAGATATAGACAGGCTAGAAGAGCTGCAGAGCTTTCTCTT
ATATAAAAACAAGTTGACCTACCTTCCCTACTCCATGCTGAACCTGAAGAAGCTCACCCTGTTGGTCGTCAGTGGGGACC
ATTTGGTGGAGCTCCCAACTGCCCTTTGTGACTCTTCCACACCTTTAAAATTTGTAAGCCTTATGGACAATCCTATTGAT
AATGCCCAATGTCAAGATGGCGATGAAATAATGGAGAGTGAACGAGATCGCCAACATTTTGATAAAGAATTCATGAAAGC
CTATATTGAAGACCTTAAAGAAAGAGAATCTGTTCCCAGCTATACCACCAAAGTGTCTTTTAGCCTTCAACTTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 0 .02 RPM
SRP051959_skeletal_muscle 61 .71 RPM
SRP051959_lymph_node 0 .02 RPM
SRP051959_lung 0 .10 RPM
SRP051959_liver 0 .39 RPM
SRP051959_kidney 0 .00 RPM
SRP051959_heart 33 .98 RPM
SRP051959_colon 0 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000163827 ortholog_one2one 1 retrogene
retro_hsap_2346,
Gorilla gorilla ENSGGOG00000004427 ortholog_one2one 1 retrogene
retro_ggor_1782,
Pongo abelii ENSPPYG00000013932 ortholog_one2one 1 retrogene
retro_pabe_2124,
Pan troglodytes ENSPTRG00000014852 ortholog_one2one 1 retrogene
retro_ptro_1718,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2714 75.17 79.78
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Download FASTA sequences of all ENSCJAG00000002149 retrocopies